Factsheet for Solyc08g067260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	96.44	90.37
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	76.28	72.83
KRH52284	Soybean	nucleus	75.49	71.4
KRH61616	Soybean	nucleus	75.49	71.27
GSMUA_Achr6P11690_001	Banana	cytosol, peroxisome, plastid	67.19	69.82
CDX77038	Canola	cytosol, endoplasmic reticulum, plasma membrane	73.12	69.55
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	75.1	69.09
GSMUA_Achr3P02010_001	Banana	golgi, peroxisome, plastid	60.87	69.06
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	74.11	68.56
CDY11498	Canola	endoplasmic reticulum, peroxisome, plasma membrane	74.11	68.43
CDX76724	Canola	cytosol, endoplasmic reticulum, plasma membrane	73.91	68.37
CDY35309	Canola	cytosol, endoplasmic reticulum, plasma membrane	74.11	68.31
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	70.75	68.19
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	70.16	65.74
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	70.36	65.56
TraesCS4D01G296400.1	Wheat	cytosol, peroxisome, plasma membrane	69.96	65.56
TraesCS4B01G297500.1	Wheat	golgi	69.96	65.56
Zm00001d027904_P001	Maize	plastid	69.96	65.19
Os03t0181500-01	Rice	plasma membrane	69.57	64.94
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	56.72	64.35
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	52.37	60.5
Solyc08g067410.1.1	Tomato	plasma membrane	52.17	52.28
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	53.36	52.22
Solyc09g083050.2.1	Tomato	plasma membrane	52.57	51.85
Solyc06g065560.1.1	Tomato	nucleus	51.98	51.27
Solyc12g006820.1.1	Tomato	plasma membrane	50.0	50.6
Solyc03g005320.2.1	Tomato	plasma membrane	51.58	50.29
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	47.43	48.68
Solyc06g053870.2.1	Tomato	mitochondrion	45.85	47.74
Solyc02g085870.2.1	Tomato	plasma membrane	46.44	47.38
Solyc10g009240.2.1	Tomato	peroxisome	49.41	47.26
Solyc02g063140.2.1	Tomato	golgi	46.25	47.18
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	44.27	45.34
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	44.66	43.55
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	42.49	43.43
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	32.41	36.36
Solyc09g065780.2.1	Tomato	endoplasmic reticulum, golgi	30.43	34.84

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
ncoils:Coil	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0006633	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009416	GO:GO:0009628
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
GO:GO:0080167	InterPro:IPR016039	UniProt:K4CLV2	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417
PANTHER:PTHR31561	PANTHER:PTHR31561:SF2	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc08g067260.2	EnsemblPlants:Solyc08g067260.2.1	TMHMM:TMhelix
InterPro:Thiolase-like	UniParc:UPI000276C274	:	:	:	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4CLV2]

Coordinates

chr8:+:56310478..56314307

Molecular Weight (calculated)

57490.1 Da

IEP (calculated)

8.891

GRAVY (calculated)

-0.223

Length

506 amino acids

Sequence
(BLAST)

001: MAREEHLLST EIVNRGISDE GSQTFSVRVR RRLPDFLQSV NLKYVKLGYH YLIKHGIYLA ILPVLVLVFS AEIGSLSREE LWRRVWDSTT RYDLATVLSF
101: VALFVFTISL YIMSKPKPIY LLDFACYKPS DDLKVTKEQF IELARNSGKF DESSLEFKKR ILECSGIGDE SYVPRSIGSS ENTATMKEGR YEASTVMFGA
201: LDELFEKAKI RPKDVGVLVV NCSIFNPTPS LSAMIINHYK MRGNILSFNL GGMGCSAGII ALDLARDMLQ ANPNNYAIVV SGEMVGYNWY PGKQRSILEH
301: IVRTHKASND RAFRCIYQEE DSEHYKGLKI SKDLVEVGGD ALKTNITTLG PLVLPLSEQL FFFGNLVWRH LFGNKNAKTN NSQQANNIKP YIPDYKLAFE
401: HFCVYAASKT VLDELQRNLE LSEENMEASR ATLHRFGNTS SSSIWYELAY LEAKEKIRRG DRVWQIAFGS GFKCNSAVWK AIRRVKKPST NPWLGCVDRY
501: PESLTQ

Best Arabidopsis Sequence Match ( AT2G26250.1 )
(BLAST)

001: MGRSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFSAEVG SLSREEIWKK LWDYDLATVI
101: GFFGVFVLTA CVYFMSRPRS VYLIDFACYK PSDEHKVTKE EFIELARKSG KFDEETLGFK KRILQASGIG DETYVPRSIS SSENITTMKE GREEASTVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNILSY NLGGMGCSAG IIAIDLARDM LQSNPNSYAV VVSTEMVGYN WYVGSDKSMV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGFKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPAAKTST TTSFSTSATA KTNGIKSSSS DLSKPYIPDY KLAFEHFCFH AASKVVLEEL QKNLGLSEEN MEASRMTLHR FGNTSSSGIW YELAYMEAKE
501: SVRRGDRVWQ IAFGSGFKCN SVVWKAMRKV KKPTRNNPWV DCINRYPVPL

Arabidopsis Description

FDH3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VYA3]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.