Factsheet for Bra007766.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
cytosol 1
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11498	Canola	endoplasmic reticulum, peroxisome, plasma membrane	99.63	99.45
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	91.59	95.43
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	95.25	94.73
KRH61616	Soybean	nucleus	75.87	77.43
KRH52284	Soybean	nucleus	75.69	77.38
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	74.59	76.98
GSMUA_Achr6P11690_001	Banana	cytosol, peroxisome, plastid	68.37	76.8
GSMUA_Achr3P02010_001	Banana	golgi, peroxisome, plastid	61.43	75.34
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	68.56	74.11
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	72.94	73.89
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	70.2	70.72
Os03t0181500-01	Rice	plasma membrane	70.02	70.66
Zm00001d027904_P001	Maize	plastid	70.02	70.53
TraesCS4D01G296400.1	Wheat	cytosol, peroxisome, plasma membrane	69.47	70.37
TraesCS4B01G297500.1	Wheat	golgi	69.47	70.37
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	69.29	70.19
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	56.67	69.51
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	53.38	66.67
Bra025738.1-P	Field mustard	plasma membrane	53.2	57.51
Bra031081.1-P	Field mustard	plasma membrane	53.56	57.34
Bra034634.1-P	Field mustard	golgi	48.45	55.91
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	52.83	55.9
Bra004034.1-P	Field mustard	plasma membrane	49.73	55.28
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	46.07	55.26
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	52.47	54.56
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.46	54.44
Bra035992.1-P	Field mustard	plasma membrane	52.1	54.18
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	51.92	53.69
Bra032621.1-P	Field mustard	plasma membrane	46.44	51.73
Bra024749.1-P	Field mustard	plasma membrane	46.98	51.71
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	41.13	48.81
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	43.14	48.46
Bra017641.1-P	Field mustard	golgi	42.23	47.93
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	42.05	45.45
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	35.28	42.98
Bra020664.1-P	Field mustard	plastid	34.73	42.89
Bra003934.1-P	Field mustard	plasma membrane	35.1	25.7

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C	EnsemblPlantsGene:Bra007766
EnsemblPlants:Bra007766.1	EnsemblPlants:Bra007766.1-P	ncoils:Coil	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	UniProt:M4CU72	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF2	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0002542C2B	SEG:seg

Description

AT2G26250 (E=2e-290) FDH, KCS10 | KCS10 (3-KETOACYL-COA SYNTHASE 10); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA09:+:30791380..30793599

Molecular Weight (calculated)

61483.0 Da

IEP (calculated)

9.253

GRAVY (calculated)

-0.172

Length

547 amino acids

Sequence
(BLAST)

001: MGSSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFGAEVG SLSREEIWNK LWDYDIATVI
101: GFFGVFVLTV CVYFMSRPRS VYLIDFACYK PSDELKVTRE EFIDLARKSG KFDEETLGFK KRILQASGLG DETYVPRSIS SSDNITTMKE GREEASMVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNILSY NLGGMGCSAG IIALDLARDM LQSNPNSYAV VVSTEMVGYN WYVGRDKSMV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGFKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPATKTIT SSSTTAKTNG AKSSSSSDLS KPYIPDYKLA FEHFCFHAAS KAVLDELQKN LGLSEENMEA SRMTLQRFGN TSSSGIWYEL AYLEAKESVR
501: RGDRVWQIAF GSGFKCNSVV WKAMRKVKKP ARNNPWVDCI SRYPVAL

Best Arabidopsis Sequence Match ( AT2G26250.1 )
(BLAST)

001: MGRSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFSAEVG SLSREEIWKK LWDYDLATVI
101: GFFGVFVLTA CVYFMSRPRS VYLIDFACYK PSDEHKVTKE EFIELARKSG KFDEETLGFK KRILQASGIG DETYVPRSIS SSENITTMKE GREEASTVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNILSY NLGGMGCSAG IIAIDLARDM LQSNPNSYAV VVSTEMVGYN WYVGSDKSMV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGFKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPAAKTST TTSFSTSATA KTNGIKSSSS DLSKPYIPDY KLAFEHFCFH AASKVVLEEL QKNLGLSEEN MEASRMTLHR FGNTSSSGIW YELAYMEAKE
501: SVRRGDRVWQ IAFGSGFKCN SVVWKAMRKV KKPTRNNPWV DCINRYPVPL

Arabidopsis Description

FDH3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VYA3]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.