Factsheet for Bra025738.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29431	Canola	plasma membrane	94.66	98.97
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	93.48	91.67
Bra031081.1-P	Field mustard	plasma membrane	92.49	91.59
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	81.82	80.08
PGSC0003DMT400009451	Potato	cytosol, peroxisome, plasma membrane	82.02	79.96
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	71.34	79.17
KRH05829	Soybean	cytosol, peroxisome, plasma membrane	80.24	79.14
KRH15203	Soybean	plasma membrane	79.64	79.02
Zm00001d009608_P001	Maize	plasma membrane	76.88	77.03
GSMUA_Achr2P08980_001	Banana	golgi, peroxisome, plasma membrane	69.76	76.41
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.48	76.33
Zm00001d039053_P001	Maize	plasma membrane	77.47	76.26
Os05t0568000-02	Rice	plasma membrane	77.47	76.26
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	77.47	75.38
TraesCS1A01G406200.1	Wheat	plasma membrane	76.88	74.52
TraesCS1D01G414600.1	Wheat	peroxisome	77.27	74.48
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	77.27	74.48
GSMUA_Achr6P27270_001	Banana	cytosol, peroxisome, plasma membrane	61.07	73.22
Bra034634.1-P	Field mustard	golgi	67.59	72.15
GSMUA_Achr9P06980_001	Banana	cytosol, golgi, peroxisome	66.8	71.76
GSMUA_Achr5P09090_001	Banana	golgi, peroxisome, plasma membrane	56.92	68.74
HORVU1Hr1G089710.3	Barley	plastid	77.47	66.55
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	66.21	64.8
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	62.45	62.45
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	56.72	62.26
Bra017641.1-P	Field mustard	golgi	59.09	62.03
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	59.68	62.01
Bra004034.1-P	Field mustard	plasma membrane	59.88	61.59
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	63.64	61.22
Bra035992.1-P	Field mustard	plasma membrane	63.44	61.03
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	63.24	60.49
Bra024749.1-P	Field mustard	plasma membrane	58.7	59.76
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	55.73	53.71
Bra032621.1-P	Field mustard	plasma membrane	51.98	53.56
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	57.51	53.2
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	41.7	46.99
Bra020664.1-P	Field mustard	plastid	39.33	44.92
Bra003934.1-P	Field mustard	plasma membrane	41.7	28.25

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra025738	EnsemblPlants:Bra025738.1	EnsemblPlants:Bra025738.1-P	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	UniProt:M4EAD0	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF65	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000253EE74	SEG:seg

Description

AT1G19440 (E=1e-271) KCS4 | KCS4 (3-KETOACYL-COA SYNTHASE 4); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA06:+:7594024..7595544

Molecular Weight (calculated)

56710.7 Da

IEP (calculated)

9.298

GRAVY (calculated)

-0.076

Length

506 amino acids

Sequence
(BLAST)

001: MDGAGDDGNG SVGVQIRQTR RLPDYLQSVN LKYVKLGYHY VISNLLTLCL LPLAVVISVQ ASHDDLRHLW LHLQYNLVSI ITCSAILVFG LTVYVMTRPR
101: PVYLVDFSCY LPPDHLKAPF SRFMAHSRLT GDFDDSALEF QRKILQRSGL GEDTYVPEGM HHVPPRISMA AAREEAEQVM FGALDSLFEN TNINPKDIGI
201: LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRKTYA VVVSTENITQ NWYFGNNKAM LIPNCLFRVG GSAVLLSNKS
301: SDKRRSKYRL SHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFTTLVV KKLFNGKVKP YIPDFKLAFE
401: HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAVWE ALRNVKPSKN SPWEDCIDKY
501: PVTLSY

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.