Factsheet for HORVU1Hr1G089710.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G414600.1	Wheat	peroxisome	86.93	97.52
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	86.76	97.33
TraesCS1A01G406200.1	Wheat	plasma membrane	86.08	97.13
Os05t0568000-02	Rice	plasma membrane	79.97	91.63
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	80.14	90.77
Zm00001d039053_P001	Maize	plasma membrane	78.78	90.27
Zm00001d009608_P001	Maize	plasma membrane	76.91	89.7
CDX89699	Canola	cytosol	44.14	80.0
GSMUA_Achr6P27270_001	Banana	cytosol, peroxisome, plasma membrane	57.05	79.62
GSMUA_Achr2P08980_001	Banana	golgi, peroxisome, plasma membrane	61.12	77.92
CDY29431	Canola	plasma membrane	63.67	77.48
Bra025738.1-P	Field mustard	plasma membrane	66.55	77.47
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	67.4	76.79
CDY26665	Canola	cytosol, peroxisome, plasma membrane	64.35	76.57
Bra031081.1-P	Field mustard	plasma membrane	66.38	76.52
PGSC0003DMT400009451	Potato	cytosol, peroxisome, plasma membrane	67.4	76.49
CDX81929	Canola	plasma membrane	66.21	76.47
CDY21665	Canola	plasma membrane	66.21	76.47
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	66.89	76.36
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	59.08	76.32
CDY47457	Canola	cytosol, endoplasmic reticulum, plasma membrane	50.25	76.09
VIT_18s0001g12550.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.53	75.83
KRH05829	Soybean	cytosol, peroxisome, plasma membrane	66.04	75.83
KRH15203	Soybean	plasma membrane	65.53	75.69
KRH51526	Soybean	plasma membrane	56.54	75.17
GSMUA_Achr9P06980_001	Banana	cytosol, golgi, peroxisome	59.93	74.95
CDX71278	Canola	cytosol, peroxisome, plasma membrane	63.84	74.16
CDY46211	Canola	cytosol, peroxisome, plasma membrane	63.84	74.16
AT2G16280.1	Thale cress	golgi, peroxisome, plasma membrane	64.35	74.02
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.67	73.96
CDY47458	Canola	cytosol	5.94	70.0
GSMUA_Achr5P09090_001	Banana	golgi, peroxisome, plasma membrane	49.75	69.93
CDY10355	Canola	cytosol	30.22	68.99
CDX76286	Canola	golgi	55.52	68.99
CDY46243	Canola	golgi	55.35	68.78
AT4G34510.1	Thale cress	plasma membrane	56.71	68.58
Bra034634.1-P	Field mustard	golgi	54.84	68.14
CDY26762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	54.33	67.8
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	57.39	65.25
HORVU4Hr1G067340.2	Barley	golgi	54.84	64.47
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	48.39	61.82
CDX75415	Canola	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.22	61.21
CDX69040	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	48.22	61.21
AT2G15090.1	Thale cress	golgi	49.75	60.91
CDX71202	Canola	endoplasmic reticulum, golgi, plasma membrane	49.07	60.59
CDX89700	Canola	endoplasmic reticulum, golgi, plasma membrane	44.31	60.56
CDY17465	Canola	plasma membrane	48.56	60.21
Bra017641.1-P	Field mustard	golgi	49.24	60.17
CDY02266	Canola	endoplasmic reticulum, golgi, plasma membrane	45.16	59.78
CDX72475	Canola	endoplasmic reticulum, golgi	42.78	59.57
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	49.75	59.43
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	58.06	59.27
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	48.73	58.93
AT4G34520.1	Thale cress	golgi	50.42	58.7
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	50.42	58.7
CDY49290	Canola	endoplasmic reticulum, golgi	41.94	58.39
CDX76287	Canola	endoplasmic reticulum, golgi, plasma membrane	50.08	58.3
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	58.23	57.17
HORVU4Hr1G063420.1	Barley	peroxisome	49.58	53.58
HORVU4Hr1G073840.2	Barley	golgi	45.16	52.26
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	40.41	51.74
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	42.11	51.24
HORVU7Hr1G023540.1	Barley	mitochondrion	24.11	49.82
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	37.01	49.77
HORVU7Hr1G006910.1	Barley	plasma membrane	41.09	49.69
HORVU1Hr1G086760.1	Barley	cytosol	42.44	49.51
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	39.73	48.25
HORVU3Hr1G097570.1	Barley	golgi	39.56	47.65
HORVU6Hr1G082270.1	Barley	golgi	40.24	46.29
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	37.69	45.31
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	35.65	44.87
HORVU7Hr1G023280.1	Barley	plasma membrane	34.3	44.69
HORVU7Hr1G042040.1	Barley	golgi	37.35	44.35
HORVU6Hr1G004830.1	Barley	golgi	37.35	44.35
HORVU7Hr1G042050.1	Barley	golgi	36.5	44.15
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	34.13	42.41
HORVU7Hr1G030880.1	Barley	plasma membrane	35.65	42.08
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	25.81	41.64
HORVU5Hr1G087530.1	Barley	plasma membrane	34.3	41.56
HORVU7Hr1G022720.1	Barley	plasma membrane	25.3	41.5
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	36.84	40.49
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	33.79	40.28

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287GND2
InterPro:ACP_syn_III_C	EMBL:AK367073	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU1Hr1G089710
EnsemblPlants:HORVU1Hr1G089710.3	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF65	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B477A7A	SEG:seg

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287GND2]

Coordinates

chrchr1H:-:544690501..544692847

Molecular Weight (calculated)

65469.8 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.066

Length

589 amino acids

Sequence
(BLAST)

001: VSSHLAVRLF IPSHSANNGL RLLRRRRIRS LRRPAPTIPA PPPTSPPATV VPLPPQHARV VKHQSRRPIR GPMNGGIAPP PAMETAATTP SHRRLPDFLQ
101: SVNLKYVKLG YHYLITHLIT LLLLPLMAVI VLEAGRTDPD DLRQLWLHLQ YNLVSVLVLS AVLVFGATVY VLTRPRPVYL VDFACYKAPD HLKVGFQEFL
201: RHSALCGFSD DALEFQRKIL ERSGLSEETY CPEGMHAIPP EPTMANARAE AESVMFGALD SLFAATGVKP KDVGILVVNC SLFNPTPSLS AMIVNRYKLR
301: GNVRSFNLGG MGCSAGVIAI DLARDMLQVH RGTYAVVVST ENITQNWYFG NRKSMLIPNC LFRVGCSAVL LSNRGADRRR AKYSLKHVVR THKGADDKAF
401: NCVYQEQDSE GKTGVSLSKD LMAIAGGALK TNITTLGPLV LPFSEQLLFF ATLVSKKLFN AKVKPYIPDF KLAFEHFCIH AGGRAVIDEL EKNLQLQPVH
501: VEASRMTLHR FGNTSSSSIW YELAYMEAKG RVRRGDRIWQ IAFGSGFKCN SAVWHALRNV KPSPTTPWDD CIDRYPVELV DGFPTHTHK

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.