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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21665 Canola plasma membrane 98.04 98.04
Bra031081.1-P Field mustard plasma membrane 98.04 97.85
CDY29431 Canola plasma membrane 87.06 91.74
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 92.75 91.67
CDY26665 Canola cytosol, peroxisome, plasma membrane 88.63 91.31
CDX89699 Canola cytosol 53.33 83.69
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 82.55 81.43
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 82.55 81.12
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 59.61 78.15
KRH15203 Soybean plasma membrane 78.04 78.04
KRH05829 Soybean cytosol, peroxisome, plasma membrane 78.24 77.78
Os05t0568000-02 Rice plasma membrane 78.04 77.43
Zm00001d009608_P001 Maize plasma membrane 76.67 77.43
CDX71278 Canola cytosol, peroxisome, plasma membrane 76.86 77.32
Zm00001d039053_P001 Maize plasma membrane 77.45 76.85
CDY46211 Canola cytosol, peroxisome, plasma membrane 76.27 76.73
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 69.41 76.62
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 77.84 76.35
CDY47458 Canola cytosol 7.45 76.0
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 62.35 75.36
TraesCS1A01G406200.1 Wheat plasma membrane 76.08 74.33
TraesCS1D01G414600.1 Wheat peroxisome 76.47 74.29
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 76.27 74.1
CDX76286 Canola golgi 68.04 73.21
CDY46243 Canola golgi 67.84 73.0
CDY10355 Canola cytosol 36.86 72.87
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 65.88 71.34
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 64.12 69.28
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 56.86 69.21
CDX94721 Canola cytosol 53.14 68.43
HORVU1Hr1G089710.3 Barley plastid 76.47 66.21
CDY15199 Canola cytosol 43.73 65.59
CDX70186 Canola plastid 65.88 65.5
CDX98800 Canola plastid 65.69 64.67
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 56.08 64.27
CDY63070 Canola cytosol 46.27 64.13
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 53.73 63.57
CDY07381 Canola plasma membrane 60.78 62.37
CDY17465 Canola plasma membrane 58.04 62.32
CDX89834 Canola plasma membrane 63.33 62.0
CDY04232 Canola plasma membrane 60.2 61.77
CDY14892 Canola endoplasmic reticulum, golgi, plastid 63.14 61.22
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 57.06 61.01
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.49 60.99
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.49 60.99
CDX96912 Canola endoplasmic reticulum, golgi, plastid 62.94 60.91
CDY18212 Canola plasma membrane 63.14 60.87
CDY42109 Canola plasma membrane 59.02 60.56
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 59.41 59.88
CDX72475 Canola endoplasmic reticulum, golgi 49.61 59.81
CDY49290 Canola endoplasmic reticulum, golgi 49.41 59.57
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 56.67 54.32
CDX90012 Canola cytosol 55.69 53.69
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 57.25 53.28
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 56.86 52.82
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 56.47 52.65
CDY32443 Canola plasma membrane 48.82 52.09
CDY37475 Canola plasma membrane 48.63 51.88
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.18 46.77
CDY37951 Canola endoplasmic reticulum, plasma membrane 41.18 46.77
CDY49219 Canola endoplasmic reticulum, plasma membrane 41.18 46.36
CDX68323 Canola endoplasmic reticulum, golgi 40.39 45.68
CDY33931 Canola plastid 39.02 43.54
CDY05644 Canola plasma membrane, plastid, vacuole 39.02 43.54
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.98 40.82
CDY41551 Canola golgi 50.2 40.7
CDY49218 Canola plasma membrane 0.39 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078D0Z0InterPro:ACP_syn_III_CEnsemblPlants:CDX81929ProteinID:CDX81929ProteinID:CDX81929.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00136892001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF65MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0001B6422FSEG:seg
Description
BnaC08g36720D
Coordinates
chrLK031826:+:1534980..1537062
Molecular Weight (calculated)
57176.5 Da
IEP (calculated)
9.398
GRAVY (calculated)
-0.044
Length
510 amino acids
Sequence
(BLAST)
001: MDGAGGSSRD GSVGVQIRQT RILPDFLQSV NLKYVKLGYH YLISNLLALC LLPLAVVISV EASQTDPEDL RQLWIHLQYN LVSIIACSAV LVFGLTVYVM
101: TRPRPIYLVD FSCYLPPDRL KVPVSRFMNH STLTGDFDES SLEFQRKILE RSGLGEDTYL PEAMHHVPPT ISMAAAREEA EQVMFGALDK LFTNTNVKAK
201: DIGVLVVNCS LFNPTPSLSA MIVNKYKLRG NIRSYNLGGM GCSAGVIAVD LAKDMLLVHR NTYAVVVSTE NITQNWYFGN KKAMLIPNCL FRVGGSAVLL
301: SNKSRDKRRS KYRLSHVVRT HRGADDKAFR CVYQEQDDTR RTGVSLSKEL MAIAGETLKT NITTLGPLVL PISEQILFFL TLVVKKLFNG KVKPYIPDFK
401: LAFEHFCIHA GGRAVIDELE KNLQLSPVHV EASRMTLHRF GNTSSSSIWY ELAYIEAKGR MRRGNRVWQI AFGSGFKCNS AVWEALRNVK PSKDSPWEDC
501: IDKYPVTLSY
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.