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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 97.62 97.45
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 91.96 94.55
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 94.7 94.35
AT2G26250.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 94.15 93.64
KRH61616 Soybean nucleus 75.32 76.87
KRH52284 Soybean nucleus 75.14 76.82
GSMUA_Achr6P11690_001 Banana cytosol, peroxisome, plastid 68.01 76.39
VIT_04s0008g02250.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 73.86 76.23
GSMUA_Achr3P02010_001 Banana golgi, peroxisome, plastid 60.69 74.44
Solyc08g067260.2.1 Tomato cytosol, peroxisome, plasma membrane 68.37 73.91
PGSC0003DMT400019063 Potato cytosol, peroxisome, plasma membrane 72.58 73.52
EER95395 Sorghum cytosol, peroxisome, plasma membrane 69.84 70.35
Os03t0181500-01 Rice plasma membrane 69.65 70.3
Zm00001d027904_P001 Maize plastid 69.65 70.17
TraesCS4B01G297500.1 Wheat golgi 69.1 70.0
TraesCS4D01G296400.1 Wheat cytosol, peroxisome, plasma membrane 69.1 70.0
TraesCS4A01G007400.1 Wheat cytosol, peroxisome, plasma membrane 68.92 69.81
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 55.94 68.61
HORVU4Hr1G076940.1 Barley mitochondrion, peroxisome, plastid 53.02 66.21
CDX89699 Canola cytosol 36.93 62.15
CDY47458 Canola cytosol 5.67 62.0
CDY15199 Canola cytosol 37.84 60.88
CDX94721 Canola cytosol 43.14 59.6
CDY10355 Canola cytosol 26.87 56.98
CDY21665 Canola plasma membrane 52.83 56.67
CDX81929 Canola plasma membrane 52.65 56.47
CDY29431 Canola plasma membrane 49.91 56.41
CDY63070 Canola cytosol 37.84 56.25
CDX70186 Canola plastid 52.65 56.14
CDY46243 Canola golgi 48.26 55.7
CDX76286 Canola golgi 48.08 55.49
CDY26665 Canola cytosol, peroxisome, plasma membrane 49.73 54.95
CDX98800 Canola plastid 51.92 54.83
CDX71278 Canola cytosol, peroxisome, plasma membrane 50.64 54.64
CDY46211 Canola cytosol, peroxisome, plasma membrane 50.27 54.24
CDY07381 Canola plasma membrane 48.99 53.92
CDY04232 Canola plasma membrane 48.81 53.72
CDY14892 Canola endoplasmic reticulum, golgi, plastid 51.37 53.42
CDX89834 Canola plasma membrane 50.82 53.36
CDX96912 Canola endoplasmic reticulum, golgi, plastid 51.19 53.13
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 37.66 52.96
CDY18212 Canola plasma membrane 50.82 52.55
CDY42109 Canola plasma membrane 46.44 51.11
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 39.49 50.12
CDX90012 Canola cytosol 48.08 49.72
CDY37475 Canola plasma membrane 42.96 49.16
CDY32443 Canola plasma membrane 42.96 49.16
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 39.49 48.54
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 41.68 48.31
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 40.95 48.28
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.77 48.06
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 41.32 47.38
CDY17465 Canola plasma membrane 40.77 46.95
CDX72475 Canola endoplasmic reticulum, golgi 35.83 46.34
CDY49290 Canola endoplasmic reticulum, golgi 34.92 45.15
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 41.68 45.06
CDY37951 Canola endoplasmic reticulum, plasma membrane 35.47 43.21
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 34.92 42.54
CDY49219 Canola endoplasmic reticulum, plasma membrane 34.92 42.16
CDX68323 Canola endoplasmic reticulum, golgi 34.55 41.91
CDY33931 Canola plastid 34.73 41.58
CDY05644 Canola plasma membrane, plastid, vacuole 34.73 41.58
CDY41551 Canola golgi 40.59 35.29
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 40.95 35.16
CDY49218 Canola plasma membrane 0.37 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synMapMan:5.1.6.1.1GO:A0A078CL10
InterPro:ACP_syn_III_CEnsemblPlants:CDX76724ProteinID:CDX76724ProteinID:CDX76724.1ncoils:CoilInterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00127210001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF2MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EC6B17SEG:seg
Description
BnaC08g33100D
Coordinates
chrLK031808:+:716513..718819
Molecular Weight (calculated)
61615.1 Da
IEP (calculated)
9.413
GRAVY (calculated)
-0.199
Length
547 amino acids
Sequence
(BLAST)
001: MGSSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY EKLGYHYLIN HAVYLATIPV LVLVFGAEVG SLSRDEIWKK LWDYNIATVV
101: GFFSVFVLTV CVYFMSRPRS VYLIDFACYK PSDELKVTRE EFIDLARKSG KFDEETLGFK KRILQASGIG DETYVPRSIS SSENITTMKE GREEASMVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNIISY NLGGMGCSAG IIALDLARDM LQSNPNSYAV VVSTEMVGYN WYVGRDKSRV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGYKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPAAKTVT SSSTTSKTNG AKSSSSSDLF KPYIPDYKLA FEHFCFHAAS KAVLDELQKN LGLSEENMEA SRMTLQRFGN TSSSGIWYEL AYLEAKESVR
501: RGDRVWQIAF GSGFKCNSVV WKAMRKVKKP ARNNPWVDCI SRYPVAL
Best Arabidopsis Sequence Match ( AT2G26250.1 )
(BLAST)
001: MGRSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFSAEVG SLSREEIWKK LWDYDLATVI
101: GFFGVFVLTA CVYFMSRPRS VYLIDFACYK PSDEHKVTKE EFIELARKSG KFDEETLGFK KRILQASGIG DETYVPRSIS SSENITTMKE GREEASTVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNILSY NLGGMGCSAG IIAIDLARDM LQSNPNSYAV VVSTEMVGYN WYVGSDKSMV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGFKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPAAKTST TTSFSTSATA KTNGIKSSSS DLSKPYIPDY KLAFEHFCFH AASKVVLEEL QKNLGLSEEN MEASRMTLHR FGNTSSSGIW YELAYMEAKE
501: SVRRGDRVWQ IAFGSGFKCN SVVWKAMRKV KKPTRNNPWV DCINRYPVPL
Arabidopsis Description
FDH3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VYA3]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.