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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10355 Canola cytosol 57.98 100.0
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 91.69 94.66
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 100.0 91.38
CDY47458 Canola cytosol 9.21 82.0
CDX89699 Canola cytosol 46.97 64.31
CDY17465 Canola plasma membrane 68.54 64.21
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 71.24 62.65
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 55.73 59.19
KRH51526 Soybean plasma membrane 58.88 59.14
CDX71278 Canola cytosol, peroxisome, plasma membrane 66.97 58.78
CDY46211 Canola cytosol, peroxisome, plasma membrane 66.74 58.58
CDY46243 Canola golgi 62.25 58.44
CDX76286 Canola golgi 62.02 58.23
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 60.67 58.19
CDY49290 Canola endoplasmic reticulum, golgi 55.06 57.92
CDX72475 Canola endoplasmic reticulum, golgi 54.83 57.68
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 61.8 57.65
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 60.0 57.54
VIT_03s0063g02640.t01 Wine grape plasma membrane 65.17 57.54
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 49.44 56.56
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 53.48 56.4
CDY63070 Canola cytosol 46.52 56.25
CDX81929 Canola plasma membrane 64.27 56.08
CDY21665 Canola plasma membrane 64.04 55.88
CDY26665 Canola cytosol, peroxisome, plasma membrane 61.12 54.95
CDY29431 Canola plasma membrane 59.55 54.75
CDX94721 Canola cytosol 47.64 53.54
Zm00001d009608_P001 Maize plasma membrane 60.67 53.47
Os05t0568000-02 Rice plasma membrane 61.57 53.31
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 56.18 53.08
CDY15199 Canola cytosol 40.45 52.94
Zm00001d039053_P001 Maize plasma membrane 60.9 52.72
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 54.61 52.6
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 61.12 52.31
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 55.28 52.12
TraesCS1A01G406200.1 Wheat plasma membrane 59.55 50.77
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 59.78 50.67
TraesCS1D01G414600.1 Wheat peroxisome 59.78 50.67
CDX70186 Canola plastid 57.98 50.29
CDX98800 Canola plastid 57.98 49.81
CDY07381 Canola plasma membrane 54.16 48.49
CDY42109 Canola plasma membrane 53.48 47.89
CDY04232 Canola plasma membrane 53.48 47.89
CDX89834 Canola plasma membrane 55.06 47.02
CDY14892 Canola endoplasmic reticulum, golgi, plastid 55.51 46.96
CDX96912 Canola endoplasmic reticulum, golgi, plastid 55.28 46.68
CDY18212 Canola plasma membrane 54.83 46.12
HORVU1Hr1G089710.3 Barley plastid 59.78 45.16
CDY32443 Canola plasma membrane 47.87 44.56
CDY37475 Canola plasma membrane 47.87 44.56
CDX90012 Canola cytosol 50.56 42.53
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 48.54 40.6
CDY37951 Canola endoplasmic reticulum, plasma membrane 40.9 40.53
CDY05644 Canola plasma membrane, plastid, vacuole 41.57 40.48
CDY33931 Canola plastid 41.57 40.48
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 40.67 40.31
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.9 40.18
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 49.21 39.96
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 49.21 39.89
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 48.54 39.49
CDX68323 Canola endoplasmic reticulum, golgi 40.0 39.47
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.11 35.01
CDY41551 Canola golgi 49.44 34.98
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078EM18InterPro:ACP_syn_III_CEnsemblPlants:CDY02266ProteinID:CDY02266ProteinID:CDY02266.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00113693001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF65MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EDE215:
Description
BnaA03g39010D
Coordinates
chrLK031932:-:1062475..1063938
Molecular Weight (calculated)
49569.7 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.098
Length
445 amino acids
Sequence
(BLAST)
001: MANVKLLYHY LITHFFKLFF LPLIALVATK ASSLTQEDFH NLWFHLQHNL QTLTIVFAIF TFGSTVYILT RPRPVYLVDY SCHLPPAHQK ITNLEINPSL
101: RLLGEESSLD FFYRVLERSG LGEETYLPNA LHSVPPLQNM AAAREETEQV IFDAIDNLLT NTKVNTREIG IIILNSSTFN PTPSLSAMVV NKYKLRSNIK
201: SINLGGMGCS AGVIAIDLAK DLLQVHKNTY ALVVSTENIS RNAYAGDNKS MIVANCLFRL GGAAILLSNK SEDRRRSKYK LLHTVRTHTG ADDKSFRCVQ
301: QEDDDKGKTG ISLTKDITSV AGRTITKNIA TLGPLRAIDH FCIHAGGRAL IDELEKSLGL SPVDVEPSRS TLHRFGNTSS SSIWYELAYT EAKGRMKKGN
401: KAWQIALGSG FKCNSAVWVA LRDVNPSVNS PWEHCIDKYP VKLDL
Best Arabidopsis Sequence Match ( AT4G34520.1 )
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Arabidopsis Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.