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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020664.1-P Field mustard plastid 94.97 97.97
CDY05644 Canola plasma membrane, plastid, vacuole 96.5 96.5
AT5G49070.1 Thale cress plasma membrane, vacuole 86.0 84.7
VIT_10s0042g01230.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 55.36 56.47
CDY10355 Canola cytosol 30.42 53.88
KRH12070 Soybean endoplasmic reticulum, golgi 51.42 53.53
CDY15199 Canola cytosol 39.82 53.53
CDY47458 Canola cytosol 5.69 52.0
CDX89699 Canola cytosol 36.1 50.77
CDY63070 Canola cytosol 40.26 50.0
CDX94721 Canola cytosol 42.01 48.48
CDY49219 Canola endoplasmic reticulum, plasma membrane 46.83 47.24
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 46.39 47.22
CDX68323 Canola endoplasmic reticulum, golgi 46.39 47.01
CDY37951 Canola endoplasmic reticulum, plasma membrane 45.95 46.77
CDY04232 Canola plasma membrane 49.67 45.67
CDY07381 Canola plasma membrane 49.67 45.67
CDY42109 Canola plasma membrane 48.58 44.67
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 40.7 43.16
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 42.23 41.59
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 40.48 41.57
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.01 41.38
CDX76286 Canola golgi 42.67 41.14
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 35.01 41.13
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 42.89 41.09
CDY46243 Canola golgi 42.45 40.93
CDX89834 Canola plasma membrane 45.95 40.31
CDX96912 Canola endoplasmic reticulum, golgi, plastid 45.95 39.85
CDY32443 Canola plasma membrane 41.58 39.75
CDY14892 Canola endoplasmic reticulum, golgi, plastid 45.73 39.73
CDY18212 Canola plasma membrane 45.95 39.7
CDX70186 Canola plastid 44.42 39.57
CDY37475 Canola plasma membrane 41.36 39.54
CDY17465 Canola plasma membrane 40.92 39.37
CDX90012 Canola cytosol 45.51 39.32
CDY21665 Canola plasma membrane 43.54 39.02
CDX81929 Canola plasma membrane 43.54 39.02
CDX98800 Canola plastid 44.2 39.0
CDY29431 Canola plasma membrane 40.92 38.64
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 42.45 38.34
CDX71278 Canola cytosol, peroxisome, plasma membrane 42.45 38.26
CDY46211 Canola cytosol, peroxisome, plasma membrane 42.45 38.26
CDY49290 Canola endoplasmic reticulum, golgi 35.23 38.06
CDY26665 Canola cytosol, peroxisome, plasma membrane 40.92 37.78
CDX72475 Canola endoplasmic reticulum, golgi 34.57 37.35
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 37.86 36.65
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 41.79 35.9
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 42.01 35.04
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 41.58 34.73
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 41.58 34.61
CDY41551 Canola golgi 43.76 31.8
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 43.98 31.55
CDY49218 Canola plasma membrane 0.22 0.35
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078H7T8UniProt:A0A078H7T8InterPro:ACP_syn_III_CEnsemblPlants:CDY33931ProteinID:CDY33931ProteinID:CDY33931.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00055441001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF6MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EED510SEG:seg:::
Description
BnaA02g30560D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078H7T8]
Coordinates
chrLK032324:+:331361..332734
Molecular Weight (calculated)
51539.8 Da
IEP (calculated)
9.623
GRAVY (calculated)
-0.089
Length
457 amino acids
Sequence
(BLAST)
001: MNQTIHKASP ISLTMSELTT LLSSSGSILK IFISLLVFHL VYQRVRRRVK VYLLDFTCYR APDSNRLPMS TLLETIYLAN QIDQESIDFQ ARILERSWLS
101: NQTSIPPSLT EIPLKKSLSS VQTETMTTIF TSVEDLLKKN KLSPRSIDIL ITNCSLHAPT PSLSAMVINK FHMRSNIKSF SLSGMGCAAG ILSVSLANDL
201: LKVHKGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDQ DRGNAKYELL HVVRTNKAKD DRAYRCIYQD IDSELKQGVS ITKDVITVAG
301: DVLKMNLTTL GPLVLPYLEL LQYVIRKIYK PSSSYRPNFK KAFEHFCIHT GGRAVIQAME MNLNLKKEDI EPSKMTLHRF GNTSSSSVWY ALSYLEAKRR
401: VKRGDKVLQI AFGSGFKCNS AVWRCIREVE PDTDNKWLDF IESYPVDVPD SVSIRPC
Best Arabidopsis Sequence Match ( AT5G49070.1 )
(BLAST)
001: MNQTIHRVSP ISMSISELTT LLSSGVSVFE IFAGLLVVHL IYQRIRTRVK VYLLDFTCYR APDSNRVPMS TLIETIYLDD KLDQESIDFQ ARILERSWLS
101: NQTSIPRSLM EIPLKKSLSS VKIETMTTIF TSVEDLLRKN KLSPRSIDIL ITNCSLHSPS PSLSAMVINK FHMRSNIKSF NLSGMGCAAG ILSVNLANDL
201: LQAHRGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDH DRDNAKYELL HVVRKNKAKD DRAYRCIYQD IDSDEKQGVS ITKDVISVAG
301: DMLKMNLTSL GPLVLPYLEQ FQYVIQHILC KKLKIYESNS SYTPNFKTAF EHFCIHTGGR AVIQAMEMNL KLTKVDIEPS KMTLHRFGNT SSSSIWYALS
401: YLEAKRRMKK GDRVLQIAFG SGFKCNSAVW RCIRKVEPNT ENKWLDFIDS YPVDVPDSTN IRPG
Arabidopsis Description
KCS21Probable 3-ketoacyl-CoA synthase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH27]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.