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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26665 Canola cytosol, peroxisome, plasma membrane 97.31 95.15
Bra025738.1-P Field mustard plasma membrane 98.97 94.66
CDY21665 Canola plasma membrane 92.36 87.65
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 93.39 87.6
CDX81929 Canola plasma membrane 91.74 87.06
CDX89699 Canola cytosol 53.1 79.08
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 62.81 78.15
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 81.82 76.6
PGSC0003DMT400009451 Potato cytosol, peroxisome, plasma membrane 82.02 76.49
KRH05829 Soybean cytosol, peroxisome, plasma membrane 80.58 76.02
KRH15203 Soybean plasma membrane 79.96 75.88
Zm00001d009608_P001 Maize plasma membrane 76.86 73.66
CDX71278 Canola cytosol, peroxisome, plasma membrane 76.45 72.98
Os05t0568000-02 Rice plasma membrane 77.48 72.96
Zm00001d039053_P001 Maize plasma membrane 77.27 72.76
CDY46211 Canola cytosol, peroxisome, plasma membrane 76.03 72.58
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 77.48 72.12
CDY47458 Canola cytosol 7.44 72.0
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 68.59 71.86
TraesCS1A01G406200.1 Wheat plasma membrane 76.86 71.26
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 77.27 71.24
TraesCS1D01G414600.1 Wheat peroxisome 77.27 71.24
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 59.92 68.72
CDX76286 Canola golgi 66.74 68.14
CDY46243 Canola golgi 66.53 67.93
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 66.12 67.8
CDY10355 Canola cytosol 35.95 67.44
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 65.5 67.3
CDX94721 Canola cytosol 53.1 64.9
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 55.17 63.72
HORVU1Hr1G089710.3 Barley plastid 77.48 63.67
CDY15199 Canola cytosol 44.21 62.94
CDX70186 Canola plastid 66.12 62.38
CDX98800 Canola plastid 65.91 61.58
CDY63070 Canola cytosol 46.07 60.6
CDY17465 Canola plasma membrane 58.88 60.0
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 54.75 59.55
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 52.89 59.4
CDX89834 Canola plasma membrane 62.81 58.35
CDY14892 Canola endoplasmic reticulum, golgi, plastid 63.22 58.17
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 60.74 58.1
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.58 57.97
CDY07381 Canola plasma membrane 59.5 57.95
CDX96912 Canola endoplasmic reticulum, golgi, plastid 63.02 57.87
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 55.37 57.76
CDY04232 Canola plasma membrane 58.88 57.34
CDY18212 Canola plasma membrane 62.6 57.28
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 56.41 57.23
CDY42109 Canola plasma membrane 58.06 56.54
CDX72475 Canola endoplasmic reticulum, golgi 49.38 56.5
CDY49290 Canola endoplasmic reticulum, golgi 49.17 56.26
CDX90012 Canola cytosol 57.85 52.93
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 56.2 51.13
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 56.82 50.18
CDY37475 Canola plasma membrane 49.38 50.0
CDY32443 Canola plasma membrane 49.38 50.0
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 56.41 49.91
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 56.41 49.73
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.91 43.71
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 40.5 43.65
CDY37951 Canola endoplasmic reticulum, plasma membrane 40.5 43.65
CDX68323 Canola endoplasmic reticulum, golgi 40.29 43.24
CDY33931 Canola plastid 38.64 40.92
CDY05644 Canola plasma membrane, plastid, vacuole 38.64 40.92
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 49.79 37.83
CDY41551 Canola golgi 48.97 37.68
CDY49218 Canola plasma membrane 0.41 0.7
Protein Annotations
KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1GO:A0A078GV69
UniProt:A0A078GV69EnsemblPlants:CDY29431ProteinID:CDY29431ProteinID:CDY29431.1InterPro:Chalcone/stilbene_synth_CInterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00043039001InterPro:IPR016039PFAM:PF02797PFAM:PF08392
PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF65MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433
MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724
MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EDF19A
SEG:seg:::::
Description
BnaA06g13650D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078GV69]
Coordinates
chrLK032236:-:512156..513927
Molecular Weight (calculated)
54197.9 Da
IEP (calculated)
9.325
GRAVY (calculated)
-0.053
Length
484 amino acids
Sequence
(BLAST)
001: MDGADGNGSV GVQIRQTRRL PDYLQSVNLK YVKLGYHYVI SNLLTLCLLP LAVVISVQTN PDDLRHLWLH LQYNLVSIIT CSAILVFGLT VYVMTRPRPV
101: YLVDFSCYLP PDHLKAPFSR FMAHSRLTGD FDDSALEFQR KILQRSGLGE DTYVPEGMHH VPPRISMAAA REEAEQVMFG ALDSLFEKTN INPKDIGILV
201: VNCSLFNPTP SLSAMIVNKY KLRGNIRSYN LGGMGCSAGV IAVDLAKDML LVHRKTYAVV VSTENITQNW YFGNNKAMLI PNCLFRVGGS AVLLSNKSSD
301: KRRSKYRLSH VVRTHRGADD KAFRCVYQEQ DDTGRTGVSL SKDLMAIAGE TLKTNITTLG PLVLPISEQI LFFTTLVVKK LFNGKVKPYI PDFKLAFEHF
401: CIHAGGRAVI DELEKNLQLS PVHVEASRMT LHRFGNTGNR LWQIAFGSGF KCNSAVWEAL RNVKPSKNSP WEDCIDKYPV TLSY
Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.