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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • nucleus 1
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid
Any Predictor:endoplasmic reticulum, golgi, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14892 Canola endoplasmic reticulum, golgi, plastid 99.62 99.81
Bra035992.1-P Field mustard plasma membrane 99.24 99.43
CDX94721 Canola cytosol 74.38 98.99
AT5G43760.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 94.88 94.52
CDX89834 Canola plasma membrane 86.72 87.72
CDY18212 Canola plasma membrane 86.34 86.01
CDY63070 Canola cytosol 59.39 85.05
CDY15199 Canola cytosol 47.63 73.82
CDX89699 Canola cytosol 44.97 72.92
Os11t0591200-01 Rice mitochondrion 59.39 72.45
CDX70186 Canola plastid 69.26 71.15
CDX98800 Canola plastid 69.45 70.66
PGSC0003DMT400042065 Potato cytosol 48.96 69.35
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 64.71 67.13
KXG28804 Sorghum plastid 65.65 66.28
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 64.52 66.28
Zm00001d048953_P001 Maize mitochondrion, plastid 64.52 66.28
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 64.33 66.21
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 63.38 65.23
CDY10355 Canola cytosol 31.88 65.12
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 60.53 64.71
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 59.96 64.1
PGSC0003DMT400042071 Potato plasma membrane 59.2 63.93
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 47.06 63.75
CDX76286 Canola golgi 57.12 63.5
Solyc06g053870.2.1 Tomato mitochondrion 58.44 63.37
CDY46243 Canola golgi 56.93 63.29
CDY29431 Canola plasma membrane 57.87 63.02
CDX81929 Canola plasma membrane 60.91 62.94
CDY21665 Canola plasma membrane 60.91 62.94
CDX71278 Canola cytosol, peroxisome, plasma membrane 60.34 62.72
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 64.71 62.57
CDY46211 Canola cytosol, peroxisome, plasma membrane 59.96 62.33
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 57.69 62.3
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 51.61 61.96
CDY26665 Canola cytosol, peroxisome, plasma membrane 57.87 61.62
CDY07381 Canola plasma membrane 56.17 59.56
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 50.28 59.15
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.37 59.1
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 51.99 59.05
CDY04232 Canola plasma membrane 55.6 58.95
CDY42109 Canola plasma membrane 55.41 58.75
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 54.84 58.38
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 51.23 58.19
CDY47458 Canola cytosol 5.5 58.0
KRH57768 Soybean plasma membrane 51.61 58.0
CDX90012 Canola cytosol 58.06 57.84
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.8 57.84
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 58.06 57.52
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 51.23 56.6
CDY37475 Canola plasma membrane 51.04 56.28
CDY49290 Canola endoplasmic reticulum, golgi 44.97 56.03
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 45.54 55.68
CDY32443 Canola plasma membrane 50.47 55.65
CDX72475 Canola endoplasmic reticulum, golgi 44.59 55.56
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 46.68 55.28
CDY17465 Canola plasma membrane 49.34 54.74
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 50.47 52.57
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 54.08 52.01
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 52.18 51.69
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 53.13 51.19
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 52.75 50.64
CDY37951 Canola endoplasmic reticulum, plasma membrane 40.61 47.66
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.61 47.24
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 39.85 46.77
CDX68323 Canola endoplasmic reticulum, golgi 39.85 46.56
CDY33931 Canola plastid 39.85 45.95
CDY05644 Canola plasma membrane, plastid, vacuole 39.85 45.95
CDY41551 Canola golgi 50.66 42.45
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.66 41.92
CDY49218 Canola plasma membrane 0.38 0.7
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078E770InterPro:ACP_syn_III_CEnsemblPlants:CDX96912ProteinID:CDX96912ProteinID:CDX96912.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00103800001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF25MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EDCFEFSEG:seg
Description
BnaC02g30500D
Coordinates
chrLK031896:+:333343..336092
Molecular Weight (calculated)
59071.4 Da
IEP (calculated)
9.214
GRAVY (calculated)
-0.113
Length
527 amino acids
Sequence
(BLAST)
001: MTQNQDHQPH RPVPVHVTNS DQNPNNLPNF LLSVRLKYVK LGYHYLISNA LYILLLPLLA ATLANLSSFS LNDLTLLYNH LRFHFLSATI ATALLISLST
101: AYFTTRPRRV FLLDFSCYKP DPSLICTRET FMDRSQRVGI FTEDNLAFQQ KILERSGLGQ KTYFPEALLR VPPNPCMEEA RKEAETVMFG AIEAVLEKTG
201: IKPKDIGILV VNCSLFNPTP SLSAMIVNKY KLRGNILSYN LGGMGCSAGL ISIDLAKQLL QVQPNSYALV VSTENITQNW YLGNDRSMLL SNCIFRMGGA
301: AVLLSNRSSD RSRSKYQLIH TVRTHKGADD NAFGCVYQRE DNNAEETGKV GVSLSKNLMA IAGEALKTNI TTLGPLVLPM SEQLLFFATL VARKVFKVKK
401: IKPYIPDFKL AFEHFCIHAG GRAVLDEIEK NLDLSEWHME PSRMTLNRFG NTSSSSLWYE LAYSEAKGRI KRGDRTWQIA FGSGFKCNSA VWKALRTVDP
501: VENSNPWSDE IHEFPVAVPR ITPVTSS
Best Arabidopsis Sequence Match ( AT5G43760.1 )
(BLAST)
001: MSHNQNQPHR PVPVHVTNAE PNPNPNNLPN FLLSVRLKYV KLGYHYLISN ALYILLLPLL AATIANLSSF TINDLSLLYN TLRFHFLSAT LATALLISLS
101: TAYFTTRPRR VFLLDFSCYK PDPSLICTRE TFMDRSQRVG IFTEDNLAFQ QKILERSGLG QKTYFPEALL RVPPNPCMEE ARKEAETVMF GAIDAVLEKT
201: GVKPKDIGIL VVNCSLFNPT PSLSAMIVNK YKLRGNILSY NLGGMGCSAG LISIDLAKQM LQVQPNSYAL VVSTENITLN WYLGNDRSML LSNCIFRMGG
301: AAVLLSNRSS DRSRSKYQLI HTVRTHKGAD DNAFGCVYQR EDNNAEETGK IGVSLSKNLM AIAGEALKTN ITTLGPLVLP MSEQLLFFAT LVARKVFKVK
401: KIKPYIPDFK LAFEHFCIHA GGRAVLDEIE KNLDLSEWHM EPSRMTLNRF GNTSSSSLWY ELAYSEAKGR IKRGDRTWQI AFGSGFKCNS AVWKALRTID
501: PMDEKTNPWI DEIDDFPVQV PRITPITSS
Arabidopsis Description
KCS203-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UE45]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.