CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57768	Soybean	plasma membrane	95.72	95.31
CDX94721	Canola	cytosol	55.25	65.15
CDY63070	Canola	cytosol	49.04	62.23
PGSC0003DMT400042065	Potato	cytosol	46.25	58.06
Os11t0591200-01	Rice	mitochondrion	52.68	56.94
KRH34362	Soybean	plasma membrane	61.03	55.13
KRG92437	Soybean	plasma membrane	61.03	55.13
PGSC0003DMT400041959	Potato	endoplasmic reticulum, golgi, vacuole	50.96	54.21
KRH31633	Soybean	endoplasmic reticulum, nucleus, plastid	59.74	53.97
KRH69063	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	60.17	53.93
KRH56654	Soybean	endoplasmic reticulum	57.6	52.75
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	59.31	52.66
CDY14892	Canola	endoplasmic reticulum, golgi, plastid	59.31	52.66
KRH51526	Soybean	plasma membrane	49.89	52.6
CDX89834	Canola	plasma membrane	58.67	52.59
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	57.39	52.55
Bra035992.1-P	Field mustard	plasma membrane	59.1	52.47
CDX96912	Canola	endoplasmic reticulum, golgi, plastid	59.1	52.37
PGSC0003DMT400041960	Potato	endoplasmic reticulum, golgi, vacuole	49.89	52.01
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	58.89	51.98
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	56.75	51.96
AT1G04220.1	Thale cress	plasma membrane	58.67	51.89
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	58.67	51.8
CDY18212	Canola	plasma membrane	58.46	51.61
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	56.1	51.37
GSMUA_Achr3P15310_001	Banana	cytosol, nucleus, plastid	53.53	51.23
TraesCS6A01G073300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.39	50.0
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.6	49.71
TraesCS4D01G148300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	53.96	49.22
TraesCS4A01G164400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	53.32	48.63
Zm00001d048953_P001	Maize	mitochondrion, plastid	53.32	48.54
PGSC0003DMT400014188	Potato	endoplasmic reticulum, golgi, plasma membrane	50.96	48.28
KRH05829	Soybean	cytosol, peroxisome, plasma membrane	52.68	47.95
Solyc06g053870.2.1	Tomato	mitochondrion	49.89	47.94
KXG28804	Sorghum	plastid	53.53	47.89
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	50.54	47.87
KRH68953	Soybean	cytosol, golgi, nucleus	54.18	47.74
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	50.54	47.68
PGSC0003DMT400042071	Potato	plasma membrane	49.68	47.54
KRH15203	Soybean	plasma membrane	51.82	47.45
KRH35956	Soybean	plasma membrane	50.32	47.38
KRG90814	Soybean	cytosol, golgi, plasma membrane	50.11	47.18
TraesCS6D01G071600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	54.6	46.79
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	49.04	46.17
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	51.82	45.49
KRH10421	Soybean	endoplasmic reticulum, plasma membrane	43.04	43.79
KRH12070	Soybean	endoplasmic reticulum, golgi	40.69	43.28
KRH61616	Soybean	nucleus	46.68	40.67
KRH52284	Soybean	nucleus	46.47	40.56
KRH10887	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	43.9	40.27
KRH21431	Soybean	peroxisome	43.9	40.27

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:100803579	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	EMBL:ACUP02010529	InterPro:FAE1_typ3_polyketide_synth	EnsemblPlantsGene:GLYMA_17G183700	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
UniProt:I1MW41	InterPro:IPR016039	EnsemblPlants:KRH04744	ProteinID:KRH04744	ProteinID:KRH04744.1	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF25	MetaCyc:PWY-4381	MetaCyc:PWY-5080
MetaCyc:PWY-5972	MetaCyc:PWY-6433	MetaCyc:PWY-6598	MetaCyc:PWY-7036	MetaCyc:PWY-7601	MetaCyc:PWY-7602
MetaCyc:PWY-7619	MetaCyc:PWY-7724	MetaCyc:PWY-7725	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI0001BA90F9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:23185688..23192347

Molecular Weight (calculated)

52753.4 Da

IEP (calculated)

8.514

GRAVY (calculated)

-0.031

Length

467 amino acids

Sequence
(BLAST)

001: MLKHFNMNIF FTLLIVVTLA SFYVPHLKPS LSITIPFCMV ATLAYQFIMR TPNKIYLVDF ACFKPSLECL CSKEMLLDRA KRVGFLSDEN YKLVNKILDR
101: SGLGPWTYVP EGLLEIPPRL TLEEARKETD TVLFGAVDEL LEKTGVEAKD IGILVVNCCL FNPTPSLSDS IVNRYKLRGN ILAYNLSGMG CSAGVLAVDF
201: AKQLLQAHPN SYALVLSTEN EISSMYWGNN PSMLLVNCLF RMGGSAALLS SHLSDRQRSK YELFHTLRTH VGADDNSYKC VFQEEDDENK VGVSLSKELM
301: NVARDALKVH ITSLGPVVLP ISEKLKFLVN LIERKVLKTK IESYMPNFKL AFKHFCIHTG GRAVLDRMQK SLELEDWHME PSRMTLYRFG NTSSSSVWYE
401: LAYCEAKGRI KKGDRVWQMA FGSGFKCNTA VWVALNTIEP GSIKSPWRDE IHNFPVKVDP LPVKSNK

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.