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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:plasma membrane
YLoc:peroxisome
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH03757 Soybean cytosol, peroxisome, plasma membrane 96.47 96.47
KRH63016 Soybean cytosol, peroxisome, plasma membrane 87.65 87.65
KRH54862 Soybean cytosol, peroxisome, plasma membrane 85.88 85.88
Solyc06g065560.1.1 Tomato nucleus 83.53 83.04
PGSC0003DMT400067205 Potato peroxisome 83.14 82.65
PGSC0003DMT400019029 Potato plasma membrane 81.37 82.18
Solyc08g067410.1.1 Tomato plasma membrane 81.37 82.18
GSMUA_AchrUn_... Banana peroxisome 62.55 80.35
EER88601 Sorghum endoplasmic reticulum, plasma membrane, plastid 80.39 79.46
Zm00001d046444_P001 Maize plasma membrane 80.2 79.42
GSMUA_Achr10P... Banana plasma membrane 67.06 79.17
Solyc12g006820.1.1 Tomato plasma membrane 77.25 78.8
GSMUA_Achr7P08410_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 60.2 78.52
Os05t0574600-01 Rice endoplasmic reticulum, peroxisome, plastid 79.8 78.27
PGSC0003DMT400002734 Potato cytosol, peroxisome, plasma membrane 78.24 78.08
TraesCS7B01G254900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 79.41 77.74
Os06t0598800-01 Rice cytosol, endoplasmic reticulum, plasma membrane 78.63 77.26
Zm00001d016438_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 78.04 76.98
TraesCS7D01G350500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 78.24 76.58
TraesCS6D01G166600.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 78.43 76.34
TraesCS6B01G207000.1 Wheat endoplasmic reticulum, plasma membrane, plastid 78.43 76.34
KRH34362 Soybean plasma membrane 77.06 76.02
KRG92437 Soybean plasma membrane 76.86 75.82
EES06493 Sorghum endoplasmic reticulum, peroxisome, plasma membrane, plastid 77.65 75.57
EES19987 Sorghum cytosol, endoplasmic reticulum, plastid 75.88 75.44
TraesCS7A01G372300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 77.25 74.9
KRH31633 Soybean endoplasmic reticulum, nucleus, plastid 75.88 74.85
KRH69063 Soybean endoplasmic reticulum, peroxisome, plasma membrane 75.88 74.28
Os02t0205500-01 Rice cytosol, peroxisome, plasma membrane 74.51 73.22
Zm00001d039094_P001 Maize cytosol 72.75 72.89
VIT_11s0016g04700.t01 Wine grape plastid 87.65 72.45
HORVU1Hr1G090730.1 Barley peroxisome, plasma membrane, plastid 72.35 71.24
TraesCS1A01G413400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 72.55 71.15
TraesCS1D01G420900.1 Wheat peroxisome 72.35 71.1
TraesCS6A01G177700.1 Wheat plastid 78.63 69.98
HORVU6Hr1G036950.5 Barley cytosol, peroxisome 78.24 69.15
KRH51526 Soybean plasma membrane 58.82 67.72
HORVU7Hr1G084610.6 Barley cytosol, mitochondrion, plastid 78.82 67.0
KRH15203 Soybean plasma membrane 66.27 66.27
KRH05829 Soybean cytosol, peroxisome, plasma membrane 66.27 65.89
KRH68953 Soybean cytosol, golgi, nucleus 64.71 62.26
KRH35956 Soybean plasma membrane 59.8 61.49
KRG90814 Soybean cytosol, golgi, plasma membrane 59.61 61.29
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 58.82 60.48
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.75 57.6
KRH57768 Soybean plasma membrane 52.16 56.72
KRH52284 Soybean nucleus 57.06 54.39
KRH61616 Soybean nucleus 57.06 54.29
KRH10887 Soybean endoplasmic reticulum, peroxisome, plasma membrane 51.76 51.87
KRH21431 Soybean peroxisome 50.39 50.49
KRH10421 Soybean endoplasmic reticulum, plasma membrane 43.53 48.37
KRH12070 Soybean endoplasmic reticulum, golgi 39.8 46.24
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199EntrezGene:100817884InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
InterPro:ACP_syn_III_CEMBL:ACUP02002791InterPro:FAE1_typ3_polyketide_synthEnsemblPlantsGene:GLYMA_05G011100GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747
UniProt:I1K1C8InterPro:IPR016039EnsemblPlants:KRH56654ProteinID:KRH56654ProteinID:KRH56654.1PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF19MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniParc:UPI0002339C92:::::
Description
hypothetical protein
Coordinates
chr5:-:964837..968099
Molecular Weight (calculated)
57320.7 Da
IEP (calculated)
9.471
GRAVY (calculated)
-0.102
Length
510 amino acids
Sequence
(BLAST)
001: MTDTKPDTPL TASSSRNLPD FKKSVKLKYV KLGYHYLITH GMYLCLSPLV VLIAAQLSTF SLQDLYDLWE HLQYNLISVI LCSTLLVFLS TLYFLTRPRP
101: VFLVNFSCYK PEESRKCAKR IFIDQSRLTG SFTEENLEFQ RKILERSGLG ENTYLPEAVL NIPPNPSMKE ARKEAEAVMF GAIDELLAKT SVKPKDIGIL
201: IVNCSLFNPT PSLSAMIVNH YKLRGNIKSY NLGGMGCSAG LISIDLAKDL LQANPNSYAL VISMENITLN WYFGNDRSKL VSNCLFRMGG AAVLLSNKSS
301: DRRRSKYRLV TTVRTHKGAD DKCFSCVTQE EDANGKVGVT LSKDLMAVAG DALKTNITTL GPLVLPTSEQ LLFFATLVAK KIFKMKIKPY IPDFKLAFEH
401: FCIHAGGRAV LDELEKNLQL SPWHMEPSRM TLYRFGNTSS SSLWYELAYT EAKGRIKRGD RTWQIAFGSG FKCNSAVWKA LRTINPSKEK SPWIDEIDQF
501: PVDVPRVSSI
Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Arabidopsis Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.