CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	98.24	98.24
KRH56654	Soybean	endoplasmic reticulum	87.65	87.65
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	87.06	87.06
Solyc06g065560.1.1	Tomato	nucleus	81.96	81.48
Solyc08g067410.1.1	Tomato	plasma membrane	80.39	81.19
PGSC0003DMT400019029	Potato	plasma membrane	80.39	81.19
PGSC0003DMT400067205	Potato	peroxisome	81.37	80.9
GSMUA_AchrUn_...	Banana	peroxisome	61.57	79.09
Solyc12g006820.1.1	Tomato	plasma membrane	77.06	78.6
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	78.24	78.08
GSMUA_Achr10P...	Banana	plasma membrane	65.69	77.55
GSMUA_Achr7P08410_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	59.02	76.98
Zm00001d046444_P001	Maize	plasma membrane	77.65	76.89
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	77.45	76.55
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	77.65	76.15
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	77.06	75.72
KRH34362	Soybean	plasma membrane	75.88	74.85
KRG92437	Soybean	plasma membrane	75.88	74.85
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	76.08	74.47
TraesCS6D01G166600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	76.47	74.43
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	76.27	74.24
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	74.9	73.89
TraesCS7D01G350500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	75.1	73.51
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	73.92	73.49
KRH31633	Soybean	endoplasmic reticulum, nucleus, plastid	74.31	73.31
KRH69063	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	74.71	73.13
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	74.31	72.33
Zm00001d039094_P001	Maize	cytosol	72.16	72.3
TraesCS7A01G372300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	74.12	71.86
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	72.94	71.81
Os02t0205500-01	Rice	cytosol, peroxisome, plasma membrane	72.35	71.1
TraesCS1A01G413400.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	71.96	70.58
VIT_11s0016g04700.t01	Wine grape	plastid	85.1	70.34
TraesCS1D01G420900.1	Wheat	peroxisome	71.37	70.13
KRH51526	Soybean	plasma membrane	59.22	68.17
TraesCS6A01G177700.1	Wheat	plastid	76.47	68.06
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	76.67	67.76
KRH05829	Soybean	cytosol, peroxisome, plasma membrane	65.29	64.91
KRH15203	Soybean	plasma membrane	64.9	64.9
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	75.69	64.33
KRH35956	Soybean	plasma membrane	60.2	61.9
KRG90814	Soybean	cytosol, golgi, plasma membrane	59.8	61.49
KRH68953	Soybean	cytosol, golgi, nucleus	63.73	61.32
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	58.43	60.08
KRH04744	Soybean	endoplasmic reticulum, plasma membrane, vacuole	51.96	56.75
KRH57768	Soybean	plasma membrane	51.57	56.08
KRH52284	Soybean	nucleus	57.84	55.14
KRH61616	Soybean	nucleus	57.84	55.04
KRH10887	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	50.98	51.08
KRH21431	Soybean	peroxisome	49.8	49.9
KRH10421	Soybean	endoplasmic reticulum, plasma membrane	44.71	49.67
KRH12070	Soybean	endoplasmic reticulum, golgi	40.39	46.92

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:100794273	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	EMBL:ACUP02002565	InterPro:FAE1_typ3_polyketide_synth	EnsemblPlantsGene:GLYMA_04G149300	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
UniProt:I1JW76	InterPro:IPR016039	EnsemblPlants:KRH63016	ProteinID:KRH63016	ProteinID:KRH63016.1	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF19	MetaCyc:PWY-4381	MetaCyc:PWY-5080
MetaCyc:PWY-5972	MetaCyc:PWY-6433	MetaCyc:PWY-6598	MetaCyc:PWY-7036	MetaCyc:PWY-7601	MetaCyc:PWY-7602
MetaCyc:PWY-7619	MetaCyc:PWY-7724	MetaCyc:PWY-7725	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI0001BA8B18	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:31852285..31855252

Molecular Weight (calculated)

57358.1 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.103

Length

510 amino acids

Sequence
(BLAST)

001: MAETKPDTPL MPPSSRNLPD FKKSVKLKYV KLGYHYLITH GMYLFLSPLV VLIAAQLSSF SLEDLHVIWE NLQYNLISVI VCSTLIVFLS TLYIMTRPRP
101: VYLVNFSCYK PEEARKCSKK IFMDQSRKSG FFTEETLEFQ RKILERAGLG ESTYFPEAVL NDPPNPSMKE ARKEAEAVMF GAIDELFAKT SVKPKDIGIL
201: IVNCSLFCPT PSLSAMIINH YKLRGNIKSL NLGGMGCSAG LISIDLAKDL LQVHPNSYAL VVSTENITLN WYSGNDRSKL VSNCLFRMGG AAILLSNKGS
301: DRRRSKYQLV DTVRTNKGSD DKCFGCVVQE EDSNGKIGVT LSKDLMAVAG DALKTNITTL GPLVLPMSEQ LLFFATLVGK KLFKMKIKPY IPDFKLAFEH
401: FCIHAGGRAV LDELEKNLQL STWHMEPSRM TLYRFGNTSS SSLWYELAYT EAKGRIRKGD RTWQIAFGSG FKCNSAVWKA LRTINPAKEK NPWMDEIHKF
501: PVEVPRISPL

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.