Factsheet for Os02t0205500-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26640.1	Os11t0171500-01	AT4G09570.1	19130088
AT2G26640.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	82.27	82.59
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	81.7	80.92
Os06t0598800-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	78.81	78.81
TraesCS6D01G166600.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	79.19	78.44
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	78.81	78.05
Os05t0574600-01	Rice	endoplasmic reticulum, peroxisome, plastid	75.14	75.0
GSMUA_AchrUn_...	Banana	peroxisome	57.23	74.81
KRH56654	Soybean	endoplasmic reticulum	73.22	74.51
PGSC0003DMT400067205	Potato	peroxisome	73.22	74.07
VIT_04s0008g04710.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	72.83	73.97
Solyc06g065560.1.1	Tomato	nucleus	73.03	73.88
KRH03757	Soybean	cytosol, peroxisome, plasma membrane	72.45	73.73
Solyc08g067410.1.1	Tomato	plasma membrane	71.48	73.47
PGSC0003DMT400019029	Potato	plasma membrane	71.29	73.27
GSMUA_Achr10P...	Banana	plasma membrane	60.69	72.92
Os11t0591200-01	Rice	mitochondrion	60.69	72.92
CDX70186	Canola	plastid	72.06	72.9
AT2G26640.1	Thale cress	plasma membrane	71.48	72.89
Solyc12g006820.1.1	Tomato	plasma membrane	70.13	72.8
KRH63016	Soybean	cytosol, peroxisome, plasma membrane	71.1	72.35
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	71.87	72.15
CDX98800	Canola	plastid	71.87	72.01
GSMUA_Achr7P08410_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	54.14	71.87
PGSC0003DMT400002734	Potato	cytosol, peroxisome, plasma membrane	70.52	71.62
TraesCS6A01G177700.1	Wheat	plastid	79.0	71.55
KRH54862	Soybean	cytosol, peroxisome, plasma membrane	70.13	71.37
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	79.0	71.06
Os05t0568000-02	Rice	plasma membrane	64.93	65.56
VIT_11s0016g04700.t01	Wine grape	plastid	73.41	61.75
Os03t0220100-01	Rice	golgi, mitochondrion	57.42	60.32
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	57.8	56.39
Os10t0416200-01	Rice	cytosol, mitochondrion	53.76	53.35
Os03t0181500-01	Rice	plasma membrane	53.76	51.48
Os02t0731900-01	Rice	plasma membrane	47.78	49.5
Os06t0262800-01	Rice	plasma membrane	46.82	49.19
Os01t0529800-01	Rice	plasma membrane	40.85	44.35
Os06t0260500-00	Rice	mitochondrion	42.0	41.37
Os05t0574500-01	Rice	nucleus	7.32	17.19

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	EntrezGene:4328676	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	EMBL:AK067907	ProteinID:BAD16019.1	ProteinID:BAD38439.1	ProteinID:BAF08164.1	ProteinID:BAS77556.1
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os02g0205500	EnsemblPlants:Os02t0205500-01
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF8	UniProt:Q6Z6C7
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0000358C47	RefSeq:XP_015626909.1	SEG:seg

Description

Similar to Fatty acid elongase 1. (Os02t0205500-01)

Coordinates

chr2:-:5930298..5933077

Molecular Weight (calculated)

57693.0 Da

IEP (calculated)

8.961

GRAVY (calculated)

-0.045

Length

519 amino acids

Sequence
(BLAST)

001: MDNNAEAAND GAGAGERRRL PDFQQSVRLK YVKLGYHYLI TNGVYLLLTP LIALVAVHLS TLTAGDVAGL WSHLRFNLVS VVACTTLLVF LSTVRFLTRP
101: RPVYLVDFAC YKPPPERRCS RDAFMRCSRL AGCFTAASLD FQRRIVERSG LGDDTYLPAA VLREPPNPSM AEARREAEAV MFGAVDDLLA KTGVSAKEIG
201: VLVVNCSLFN PTPSLSAMVV NHYKLRGNIV SYNLGGMGCS AGLLAIDLAK DLLQVHRNSY ALVISMENIT LNWYSGNDRS MLVSNCLFRM GGAAILLSNR
301: WSERRRSKYE LVHTVRTHKG GDDKCFGCVT QEEDGEGNVG VALSKDLMAV AGDALKTNIT TLGPLVLPLS EQLLFMATLV AKKLLKMKNV KPYIPDFKLA
401: FEHFCVHAGG RAVLDEIEKN LSLGEWQMEP SRMTLYRFGN TSSSSLWYEL AYSEAKGRVR RRDRVWQIAF GSGFKCNSAV WRALRSVDPE EEALKKNPWM
501: DEIDRFPVVV PRVSRISTD

Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)

001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI

Arabidopsis Description

KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.