Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30818 | Sorghum | golgi, mitochondrion | 87.62 | 90.14 |
| Zm00001d051787_P001 | Maize | mitochondrion | 86.23 | 89.07 |
| Zm00001d017941_P001 | Maize | plasma membrane | 87.03 | 88.44 |
| TraesCS6D01G274600.1 | Wheat | golgi, plasma membrane | 85.43 | 88.43 |
| TraesCS6A01G293700.1 | Wheat | golgi, plasma membrane | 85.23 | 88.22 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 84.83 | 87.81 |
| HORVU6Hr1G073300.1 | Barley | golgi, plasma membrane | 84.83 | 87.81 |
| TraesCS1B01G421100.1 | Wheat | golgi | 75.65 | 81.68 |
| TraesCS1D01G401000.1 | Wheat | plasma membrane | 75.25 | 81.25 |
| TraesCS1A01G392800.1 | Wheat | plasma membrane | 75.25 | 81.08 |
| Os06t0262800-01 | Rice | plasma membrane | 74.25 | 75.3 |
| HORVU1Hr1G086760.1 | Barley | cytosol | 75.65 | 75.05 |
| Os06t0260500-00 | Rice | mitochondrion | 67.86 | 64.52 |
| Os03t0220100-01 | Rice | golgi, mitochondrion | 60.68 | 61.54 |
| Os01t0529800-01 | Rice | plasma membrane | 58.48 | 61.3 |
| KRH35956 | Soybean | plasma membrane | 60.28 | 60.89 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 59.68 | 60.77 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 59.88 | 60.48 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 59.28 | 59.88 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 58.88 | 59.48 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 58.48 | 59.07 |
| PGSC0003DMT400037757 | Potato | plastid | 54.29 | 59.0 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 45.71 | 58.87 |
| Bra024749.1-P | Field mustard | plasma membrane | 58.08 | 58.55 |
| CDY42109 | Canola | plasma membrane | 58.08 | 58.55 |
| Bra004034.1-P | Field mustard | plasma membrane | 57.48 | 58.54 |
| CDY04232 | Canola | plasma membrane | 57.88 | 58.35 |
| AT1G25450.1 | Thale cress | plasma membrane | 57.29 | 58.33 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 57.68 | 58.27 |
| CDY07381 | Canola | plasma membrane | 57.68 | 58.15 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 57.48 | 58.06 |
| AT1G68530.1 | Thale cress | plasma membrane | 57.48 | 57.95 |
| Solyc02g063140.2.1 | Tomato | golgi | 57.09 | 57.66 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 56.09 | 56.88 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 55.89 | 56.68 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 54.49 | 55.49 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 46.11 | 55.0 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 55.69 | 53.76 |
| Os11t0591200-01 | Rice | mitochondrion | 45.91 | 53.24 |
| Os05t0568000-02 | Rice | plasma membrane | 51.1 | 49.81 |
| Os02t0205500-01 | Rice | cytosol, peroxisome, plasma membrane | 49.5 | 47.78 |
| Os06t0598800-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 49.1 | 47.4 |
| Os05t0574600-01 | Rice | endoplasmic reticulum, peroxisome, plastid | 49.1 | 47.31 |
| Os03t0245700-02 | Rice | cytosol, peroxisome, plastid | 45.71 | 43.05 |
| Os10t0416200-01 | Rice | cytosol, mitochondrion | 44.91 | 43.02 |
| Os03t0181500-01 | Rice | plasma membrane | 43.11 | 39.85 |
| Os05t0574500-01 | Rice | nucleus | 6.79 | 15.38 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | UniProt:A0A0N7KG16 |
| InterPro:ACP_syn_III_C | ProteinID:BAS80761.1 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 |
| EnsemblPlantsGene:Os02g0731900 | EnsemblPlants:Os02t0731900-01 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF12 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI00039390DB | SEG:seg |
Description
Similar to 3-ketoacyl-CoA synthase. (Os02t0731900-01)
Coordinates
chr2:+:30500236..30502286
Molecular Weight (calculated)
55271.3 Da
IEP (calculated)
9.422
GRAVY (calculated)
0.022
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: PKRRREEAAN QFPRRGMTSS SGQLKRLKPL YQLAVNNILA VVAVPLAAAV VLKAAELGHE EILARARALP PAHLFLAAFV PAAAAVVYLM LRPRAVYMVD
101: YACFRTSPNC RVPFATFLEH SRVWPGFEER SVRFMTRLLE RSGLGEETCL PYAQHYIPPS RDLESSRAEA ELIIFSAIDD LLAKTGISPQ DIDILVVNCS
201: LFAPTPSFTD MIINRYKLRK DVRNVHLSGM GCSAGLISVG LARNLLQVAP KGAHALVVST ETITPNYYMG QERAMLLPNC LFRMGGAAVL LSTNGAKARF
301: RLARVVRTLT GAQDGAYHCV YQEEDGRGNV GINLSKDLMS IAGDALKANI TTMGPLVLPA SEQLLFALSF MARKVLSGRI KPYIPDFRTA FEHFCIHAGG
401: RAVIDELQRS LTLSDEQVEA SRMTLHRFGN TSSSSLWYEL AYVEAKGRMR KGDRVWMIGF GSGFKCNSAA WECIRPAANA DGPWATCIHR YPVDIPDVLK
501: H
101: YACFRTSPNC RVPFATFLEH SRVWPGFEER SVRFMTRLLE RSGLGEETCL PYAQHYIPPS RDLESSRAEA ELIIFSAIDD LLAKTGISPQ DIDILVVNCS
201: LFAPTPSFTD MIINRYKLRK DVRNVHLSGM GCSAGLISVG LARNLLQVAP KGAHALVVST ETITPNYYMG QERAMLLPNC LFRMGGAAVL LSTNGAKARF
301: RLARVVRTLT GAQDGAYHCV YQEEDGRGNV GINLSKDLMS IAGDALKANI TTMGPLVLPA SEQLLFALSF MARKVLSGRI KPYIPDFRTA FEHFCIHAGG
401: RAVIDELQRS LTLSDEQVEA SRMTLHRFGN TSSSSLWYEL AYVEAKGRMR KGDRVWMIGF GSGFKCNSAA WECIRPAANA DGPWATCIHR YPVDIPDVLK
501: H
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.