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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07381 Canola plasma membrane 99.2 99.2
AT1G68530.1 Thale cress plasma membrane 94.77 94.77
CDY42109 Canola plasma membrane 87.73 87.73
KRG90814 Soybean cytosol, golgi, plasma membrane 85.51 85.69
KRH35956 Soybean plasma membrane 85.51 85.69
PGSC0003DMT400032993 Potato plasma membrane 82.29 82.46
PGSC0003DMT400062136 Potato cytosol, golgi, plasma membrane 82.29 82.46
Solyc02g085870.2.1 Tomato plasma membrane 82.29 82.46
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 82.09 82.26
Solyc02g063140.2.1 Tomato golgi 81.89 82.06
VIT_01s0011g03490.t01 Wine grape cytosol, golgi, plasma membrane 80.48 80.65
GSMUA_Achr3P02180_001 Banana plasma membrane 56.34 79.32
Os03t0220100-01 Rice golgi, mitochondrion 77.67 78.14
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 60.56 77.98
EER92628 Sorghum plasma membrane 76.86 77.33
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 68.81 77.2
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 76.26 76.72
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 75.45 75.6
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 75.25 75.4
HORVU4Hr1G067340.2 Barley golgi 75.45 74.85
Zm00001d048061_P001 Maize golgi 72.84 73.28
GSMUA_Achr3P07400_001 Banana plasma membrane 56.74 72.49
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 55.33 71.24
Zm00001d045660_P001 Maize mitochondrion 40.85 69.76
CDX89699 Canola cytosol 45.27 69.23
CDY15199 Canola cytosol 45.88 67.06
Zm00001d037328_P001 Maize cytosol 49.5 67.03
CDX94721 Canola cytosol 51.31 64.39
GSMUA_Achr5P05870_001 Banana plasma membrane 53.72 63.57
CDY10355 Canola cytosol 32.39 62.4
CDY47458 Canola cytosol 6.24 62.0
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 48.09 61.44
CDY63070 Canola cytosol 44.87 60.6
CDX71278 Canola cytosol, peroxisome, plasma membrane 61.57 60.35
CDX81929 Canola plasma membrane 61.77 60.2
CDY21665 Canola plasma membrane 61.57 60.0
Zm00001d051787_P001 Maize mitochondrion 58.35 59.79
CDY46211 Canola cytosol, peroxisome, plasma membrane 60.97 59.76
KXG30818 Sorghum golgi, mitochondrion 58.55 59.75
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 54.73 59.13
CDX76286 Canola golgi 56.34 59.07
TraesCS7A01G205700.1 Wheat golgi 58.35 59.06
TraesCS1B01G421100.1 Wheat golgi 55.13 59.05
CDY29431 Canola plasma membrane 57.34 58.88
CDY46243 Canola golgi 56.14 58.86
TraesCS7A01G032900.1 Wheat cytosol 40.85 58.67
TraesCS4B01G274700.1 Wheat plastid 56.54 58.66
TraesCS7B01G113000.1 Wheat golgi 57.95 58.66
TraesCS4D01G008100.1 Wheat plasma membrane 50.5 58.64
Zm00001d017941_P001 Maize plasma membrane 58.15 58.62
TraesCS1A01G392800.1 Wheat plasma membrane 54.73 58.49
TraesCS7D01G208500.1 Wheat golgi 57.95 58.3
TraesCS1D01G401000.1 Wheat plasma membrane 54.33 58.19
TraesCS4A01G031500.1 Wheat plasma membrane 56.34 57.97
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 56.34 57.97
Os02t0731900-01 Rice plasma membrane 58.35 57.88
KXG19727 Sorghum mitochondrion, plastid 57.34 57.81
CDY26665 Canola cytosol, peroxisome, plasma membrane 57.55 57.78
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 56.14 57.64
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 55.94 57.44
EER89559 Sorghum mitochondrion, plasma membrane 56.54 57.35
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 55.73 57.23
TraesCS6B01G324200.1 Wheat plasma membrane 55.73 57.23
Os06t0262800-01 Rice plasma membrane 56.74 57.09
TraesCS7D01G208600.1 Wheat cytosol 43.86 57.07
CDX70186 Canola plastid 58.75 56.92
TraesCS4A01G303900.1 Wheat plasma membrane 56.34 56.91
TraesCSU01G166100.1 Wheat plasma membrane 56.34 56.91
TraesCS7D01G519400.1 Wheat plasma membrane 54.53 56.58
CDX98800 Canola plastid 58.95 56.56
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 54.33 56.49
HORVU7Hr1G006910.1 Barley plasma membrane 54.93 56.06
CDY14892 Canola endoplasmic reticulum, golgi, plastid 59.15 55.89
TraesCS7D01G035700.1 Wheat plasma membrane 54.53 55.88
CDX96912 Canola endoplasmic reticulum, golgi, plastid 58.95 55.6
TraesCS7A01G532300.1 Wheat golgi 53.52 55.53
CDX89834 Canola plasma membrane 58.15 55.47
TraesCS7B01G449000.1 Wheat golgi 53.72 54.83
TraesCS7B01G449300.1 Wheat plasma membrane 52.52 54.6
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 47.28 54.52
CDY18212 Canola plasma membrane 57.95 54.44
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.51 54.24
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 52.31 54.05
TraesCS7D01G209400.1 Wheat cytosol 40.64 54.01
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 47.89 53.48
HORVU1Hr1G086760.1 Barley cytosol 54.12 53.27
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 51.11 53.25
TraesCS3B01G488500.1 Wheat plasma membrane 52.31 53.06
CDX90012 Canola cytosol 56.14 52.74
TraesCS7D01G029500.1 Wheat plasma membrane 48.49 52.74
TraesCS6A01G341400.1 Wheat golgi 53.32 52.68
TraesCS3D01G444000.1 Wheat golgi 51.51 52.35
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 48.69 52.16
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.69 52.16
TraesCS4A01G456600.1 Wheat plasma membrane 47.28 51.88
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 50.3 51.87
HORVU3Hr1G097570.1 Barley golgi 50.91 51.74
TraesCS6B01G372900.1 Wheat golgi 52.31 51.69
Os01t0529800-01 Rice plasma membrane 49.7 51.67
CDY17465 Canola plasma membrane 49.3 51.58
TraesCS2D01G508000.1 Wheat mitochondrion 33.0 51.57
TraesCS3A01G451100.1 Wheat plasma membrane 50.7 51.53
TraesCS6D01G321600.1 Wheat golgi 52.11 51.49
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.3 51.33
TraesCS3A01G279400.1 Wheat plasma membrane 50.5 51.33
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 47.08 51.32
TraesCS1D01G042300.1 Wheat golgi 49.3 51.26
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 48.69 51.16
TraesCS7A01G108300.1 Wheat plasma membrane 46.08 51.12
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 50.3 51.02
HORVU6Hr1G082270.1 Barley golgi 52.52 50.98
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 49.7 50.93
HORVU7Hr1G023540.1 Barley mitochondrion 29.18 50.88
TraesCS1A01G040900.1 Wheat golgi 48.89 50.84
CDX72475 Canola endoplasmic reticulum, golgi 43.26 50.83
Zm00001d009354_P001 Maize endoplasmic reticulum 49.7 50.82
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.9 50.82
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 54.33 50.75
TraesCS7D01G102300.1 Wheat mitochondrion 29.58 50.69
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 49.9 50.61
CDY49290 Canola endoplasmic reticulum, golgi 43.06 50.59
OQU76197 Sorghum golgi 48.69 50.52
CDY32443 Canola plasma membrane 48.49 50.42
HORVU6Hr1G004830.1 Barley golgi 50.3 50.4
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 51.31 50.4
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 45.47 50.22
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.09 50.21
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 42.05 50.12
HORVU7Hr1G042050.1 Barley golgi 49.09 50.1
CDY37475 Canola plasma membrane 48.09 50.0
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.09 50.0
TraesCS7A01G532200.1 Wheat cytosol 10.46 50.0
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.27 50.0
Zm00001d044580_P001 Maize mitochondrion 48.89 49.9
HORVU7Hr1G042040.1 Barley golgi 49.7 49.8
HORVU7Hr1G023280.1 Barley plasma membrane 45.27 49.78
TraesCS7B01G113200.1 Wheat golgi 49.7 49.7
TraesCS7A01G206000.1 Wheat golgi 49.3 49.7
CDY05644 Canola plasma membrane, plastid, vacuole 45.67 49.67
CDY33931 Canola plastid 45.67 49.67
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 54.73 49.63
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 49.5 49.5
EES00849 Sorghum endoplasmic reticulum, golgi 49.09 49.39
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.49 49.39
Os06t0260500-00 Rice mitochondrion 52.31 49.34
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.1 49.21
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 54.33 49.18
TraesCS5D01G089800.1 Wheat golgi 48.29 49.08
CDX68323 Canola endoplasmic reticulum, golgi 44.47 49.0
TraesCS5A01G076500.1 Wheat golgi 48.29 48.88
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 53.72 48.81
CDY49219 Canola endoplasmic reticulum, plasma membrane 44.47 48.79
CDY37951 Canola endoplasmic reticulum, plasma membrane 44.06 48.78
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 44.06 48.78
Zm00001d044579_P001 Maize golgi 48.09 48.38
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 44.67 48.05
TraesCS2A01G014600.1 Wheat plasma membrane 47.69 47.78
TraesCS6A01G025200.1 Wheat plasma membrane 46.68 47.64
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 45.67 47.29
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 43.66 47.07
TraesCS6A01G024400.1 Wheat plasma membrane 46.28 47.03
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 45.07 46.67
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 45.47 46.6
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 42.86 46.51
TraesCS7B01G006300.1 Wheat golgi 45.47 46.41
TraesCS4D01G008200.1 Wheat plasma membrane 45.88 46.34
HORVU5Hr1G087530.1 Barley plasma membrane 45.07 46.09
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 42.45 46.07
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 44.47 46.04
TraesCS1A01G439000.1 Wheat plasma membrane 46.28 46.0
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 41.45 45.88
TraesCS7B01G006100.1 Wheat mitochondrion 44.87 45.79
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 49.3 45.71
HORVU7Hr1G022720.1 Barley plasma membrane 33.0 45.68
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 41.85 45.41
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 42.66 45.3
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.87 45.14
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 44.87 44.87
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 44.67 44.67
HORVU7Hr1G030880.1 Barley plasma membrane 44.27 44.09
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 41.85 43.88
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 41.25 43.43
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 41.65 43.4
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 31.59 43.01
CDY41551 Canola golgi 48.69 38.47
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 48.89 38.15
CDY49218 Canola plasma membrane 0.6 1.05
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078ET59InterPro:ACP_syn_III_CEnsemblPlants:CDY04232ProteinID:CDY04232ProteinID:CDY04232.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00117959001InterPro:IPR016039PFAM:PF08392PFAM:PF08541
PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972
MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619
MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094
UniParc:UPI0004EE56A3:::::
Description
BnaC06g25830D
Coordinates
chrLK031950:-:408536..410677
Molecular Weight (calculated)
56338.2 Da
IEP (calculated)
8.821
GRAVY (calculated)
0.038
Length
497 amino acids
Sequence
(BLAST)
001: MSQAPMPDFS SSVKLKYVKL GYQYLVNHFL SLLLIPIMAI IAVELLRMGP EEILNVWNSL HFDIVQVLCS SFLVIFISTV YFMSKPCTVY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD SPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDEAR SEAQMVIFTA MDDLFKKTGL LPKDIDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAVIV STEIITPNYY KGNERAMLLP NCLFRMGSAA ILMSNRRSDR WRAKYKLCHL
301: VRTHRGADDK SYYCVYEQED REGKIGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLLSLIGRKI FNLKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELCYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.