CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	66.32	66.18
TraesCS3D01G444000.1	Wheat	golgi	66.53	65.44
TraesCS3B01G488500.1	Wheat	plasma membrane	66.53	65.31
TraesCS3A01G451100.1	Wheat	plasma membrane	65.49	64.42
EER89559	Sorghum	mitochondrion, plasma membrane	64.86	63.67
KXG30818	Sorghum	golgi, mitochondrion	63.83	63.04
HORVU3Hr1G097570.1	Barley	golgi	63.62	62.58
TraesCS6A01G341400.1	Wheat	golgi	65.28	62.43
TraesCS6B01G372900.1	Wheat	golgi	64.24	61.43
KXG19727	Sorghum	mitochondrion, plastid	62.79	61.26
TraesCS6D01G321600.1	Wheat	golgi	64.03	61.23
HORVU6Hr1G082270.1	Barley	golgi	64.24	60.35
OQU76197	Sorghum	golgi	54.89	55.11
EER92628	Sorghum	plasma membrane	56.34	54.86
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	50.73	53.51
KRH35956	Soybean	plasma membrane	54.68	53.02
Solyc02g085870.2.1	Tomato	plasma membrane	54.47	52.82
KRG90814	Soybean	cytosol, golgi, plasma membrane	54.47	52.82
PGSC0003DMT400037757	Potato	plastid	50.52	52.71
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	53.64	52.65
PGSC0003DMT400032993	Potato	plasma membrane	54.26	52.62
CDY42109	Canola	plasma membrane	54.26	52.52
Bra024749.1-P	Field mustard	plasma membrane	54.26	52.52
VIT_14s0006g02990.t01	Wine grape	plasma membrane	53.64	52.44
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	54.05	52.42
CDY04232	Canola	plasma membrane	54.05	52.31
Bra004034.1-P	Field mustard	plasma membrane	53.43	52.24
CDY07381	Canola	plasma membrane	53.85	52.11
AT1G25450.1	Thale cress	plasma membrane	53.22	52.03
GSMUA_Achr3P07400_001	Banana	plasma membrane	42.0	51.93
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	53.22	51.82
EES00849	Sorghum	endoplasmic reticulum, golgi	53.22	51.82
PGSC0003DMT400037714	Potato	plasma membrane	53.22	51.82
AT1G68530.1	Thale cress	plasma membrane	53.22	51.51
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	52.6	51.01
GSMUA_Achr5P05870_001	Banana	plasma membrane	44.49	50.95
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	52.39	50.81
Solyc02g063140.2.1	Tomato	golgi	51.98	50.4
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	50.52	49.39
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	51.35	47.59
EES19964	Sorghum	endoplasmic reticulum, plasma membrane, plastid	47.19	43.65
EES06493	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	47.19	43.32
EES19987	Sorghum	cytosol, endoplasmic reticulum, plastid	45.11	42.3
EER88601	Sorghum	endoplasmic reticulum, plasma membrane, plastid	45.32	42.25
EER91722	Sorghum	peroxisome	46.15	41.5
EES08876	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	45.53	41.17
EER95458	Sorghum	mitochondrion	45.11	41.02
KXG28804	Sorghum	plastid	43.87	40.42
EER91618	Sorghum	plastid	43.04	39.5
KXG39781	Sorghum	peroxisome	44.91	39.34
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	40.12	35.54
EES19986	Sorghum	cytosol	6.65	14.48

Protein Annotations

KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A194YIF6	InterPro:Chalcone/stilbene_synth_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlants:KXG19733	ProteinID:KXG19733
ProteinID:KXG19733.1	PFAM:PF02797	PFAM:PF08392	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF12
MetaCyc:PWY-5080	MetaCyc:PWY-5972	MetaCyc:PWY-6433	MetaCyc:PWY-6598	MetaCyc:PWY-7036	MetaCyc:PWY-7601
MetaCyc:PWY-7602	MetaCyc:PWY-7619	MetaCyc:PWY-7724	MetaCyc:PWY-7725	EnsemblPlantsGene:SORBI_3010G108200	SUPFAM:SSF53901
TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0003C69899	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:10697095..10698995

Molecular Weight (calculated)

53728.4 Da

IEP (calculated)

7.848

GRAVY (calculated)

0.124

Length

481 amino acids

Sequence
(BLAST)

001: MSPSIHMCFN IVYEKIVDNF LLIVAVPLTI AAATIAMARL EPNESADPIQ TFSHSQILSI LLFLATAVIV YYMQRPRMVY LVDYACFRAT YNYRVPSAAF
101: VEHVRQVSHF SERSVRFLTR LLERSGLGEE TCLPPVGQYI EPYNYCTLEV AREEAQLVVF SAIDDLFAKT SIAPHTIDIL VVNCSGFSPT PGFPDMIINK
201: YKMRSDIRNV HLSGMGCSAG LASVDLAKNL LQAMPPGARA LVVSTETLTP NYYFGNERAM LLPYCLFRMG GAAVLLSTSP EKARFRLKFV VRTHTAADDK
301: SYQCIYQKED DKGNKGVDLS IDLMTVAART LKANITTIAP LVLPASEKLL FAISFVSTKL LKMGTKLYVP NFLTAFEHIC IHAGGRAVID EIQRSLGLSD
401: KHVESSRMTL HRFGNISSSC LWYELAYIEA KHNMQKSDRV WMIGFGSGFK CNSAVWECIV PTHSEDGPWA TCIHRYPVHD P

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.