Factsheet for HORVU6Hr1G082270.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G321600.1	Wheat	golgi	87.3	88.87
TraesCS6A01G341400.1	Wheat	golgi	86.52	88.07
TraesCS6B01G372900.1	Wheat	golgi	85.74	87.28
HORVU3Hr1G097570.1	Barley	golgi	71.29	74.64
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	60.35	64.24
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	57.62	64.13
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	58.98	62.4
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	57.62	61.2
HORVU7Hr1G006910.1	Barley	plasma membrane	56.84	59.75
HORVU1Hr1G086760.1	Barley	cytosol	57.03	57.82
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	54.69	57.14
HORVU7Hr1G042040.1	Barley	golgi	54.88	56.65
HORVU6Hr1G004830.1	Barley	golgi	53.91	55.65
KRG90814	Soybean	cytosol, golgi, plasma membrane	53.32	55.04
KRH35956	Soybean	plasma membrane	52.34	54.03
HORVU7Hr1G042050.1	Barley	golgi	51.37	54.0
GSMUA_Achr3P07400_001	Banana	plasma membrane	40.62	53.47
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	51.56	53.23
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	51.56	53.23
VIT_14s0006g02990.t01	Wine grape	plasma membrane	50.98	53.05
Solyc02g085870.2.1	Tomato	plasma membrane	50.98	52.62
CDY04232	Canola	plasma membrane	50.98	52.52
HORVU4Hr1G067340.2	Barley	golgi	51.37	52.49
Bra004034.1-P	Field mustard	plasma membrane	50.39	52.44
CDY07381	Canola	plasma membrane	50.78	52.31
HORVU7Hr1G023540.1	Barley	mitochondrion	29.1	52.28
PGSC0003DMT400032993	Potato	plasma membrane	50.59	52.22
CDY42109	Canola	plasma membrane	50.59	52.11
Bra024749.1-P	Field mustard	plasma membrane	50.59	52.11
AT1G68530.1	Thale cress	plasma membrane	50.39	51.91
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	50.2	51.81
PGSC0003DMT400037757	Potato	plastid	46.48	51.63
GSMUA_Achr5P05870_001	Banana	plasma membrane	42.19	51.43
AT1G25450.1	Thale cress	plasma membrane	49.41	51.42
PGSC0003DMT400037714	Potato	plasma membrane	49.61	51.42
HORVU7Hr1G023280.1	Barley	plasma membrane	45.31	51.33
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	49.41	51.21
Solyc02g063140.2.1	Tomato	golgi	49.22	50.81
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	47.66	49.59
HORVU5Hr1G087530.1	Barley	plasma membrane	46.88	49.38
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	51.37	49.07
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	44.73	48.93
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	46.68	48.38
HORVU7Hr1G022720.1	Barley	plasma membrane	33.4	47.63
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	47.07	46.44
HORVU7Hr1G030880.1	Barley	plasma membrane	45.12	46.29
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	46.68	46.14
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	42.19	45.57
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	31.05	43.56
HORVU4Hr1G073840.2	Barley	golgi	41.41	41.65
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	38.67	40.82
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	45.51	40.38
HORVU1Hr1G089710.3	Barley	plastid	46.29	40.24
HORVU4Hr1G063420.1	Barley	peroxisome	42.19	39.63
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	44.73	38.17
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	28.91	33.79

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287UXJ4
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU6Hr1G082270	EnsemblPlants:HORVU6Hr1G082270.1
InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF12
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B47D3DD	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287UXJ4]

Coordinates

chrchr6H:+:547883887..547885738

Molecular Weight (calculated)

56701.2 Da

IEP (calculated)

10.069

GRAVY (calculated)

0.070

Length

512 amino acids

Sequence
(BLAST)

001: IDRTTRLRFG SMSSSRILKN LRVLYKLVVD NFLAMTIIPI AVASIVVVAR LQPDEIVGRL RALTGSYLFL SCFLPASAVT MYLISQPRKV YLVDYACFHG
101: THLHRAPFAA FLECARQSTT LNERSIRFIS RLLESSGLGE ETCLPTSVHY NPWNKYLTLE AAREEAELVV FSAIDELFSK TKVRPHTIDI LVVNCSGFNP
201: TPSFVDMVIN KYKLRGDIRS VHLSGMGCSA GLISVEAARS LLQAARRGAR ALVVSTETLS PLLYHGNERA MLLPFCLFRM GGAAVLLSTS AAKARLRLMS
301: AVRTLTAADD SSYRCIHREE DDKGHTGVNL SKDLIAAAGR TLKANITTLA PIVLPISEQV LLAVSFMAQK LSSGRFKVYV PNFLTAFEHF CIHAGGSAII
401: DEVQRSLSLL DEHVEPSRMT LHRFGNTSSS STWYELAYIE AKGRMRRGDR VWMIGFGSGF KCNSVVWKCI VPAPNTNGPW AGCIHRYPVQ IKSPKTSTKN
501: IRMAGHKTHN NK

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.