Factsheet for HORVU7Hr1G023530.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G374700.1	Wheat	plasma membrane	75.05	71.79
TraesCS1B01G387800.2	Wheat	plasma membrane	73.61	71.26
TraesCS1A01G369100.1	Wheat	golgi	72.16	69.44
HORVU4Hr1G073840.2	Barley	golgi	68.45	65.23
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	41.86	50.88
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	51.96	48.65
HORVU7Hr1G023540.1	Barley	mitochondrion	26.8	45.61
HORVU4Hr1G067340.2	Barley	golgi	47.01	45.51
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	41.86	44.13
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	43.71	43.8
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	52.78	42.67
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	50.72	42.63
HORVU1Hr1G086760.1	Barley	cytosol	43.92	42.18
HORVU7Hr1G006910.1	Barley	plasma membrane	42.27	42.09
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	39.38	40.81
HORVU4Hr1G063420.1	Barley	peroxisome	45.15	40.18
HORVU7Hr1G023280.1	Barley	plasma membrane	37.11	39.82
HORVU1Hr1G089710.3	Barley	plastid	48.25	39.73
HORVU3Hr1G097570.1	Barley	golgi	39.59	39.26
HORVU6Hr1G082270.1	Barley	golgi	40.82	38.67
HORVU7Hr1G042050.1	Barley	golgi	38.14	37.99
HORVU6Hr1G004830.1	Barley	golgi	38.35	37.5
HORVU7Hr1G022720.1	Barley	plasma membrane	27.63	37.33
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	36.29	37.13
HORVU7Hr1G042040.1	Barley	golgi	37.73	36.9
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	37.11	36.73
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	27.01	35.89
HORVU5Hr1G087530.1	Barley	plasma membrane	35.67	35.6
HORVU7Hr1G030880.1	Barley	plasma membrane	36.49	35.47
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	35.05	34.41
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	37.53	33.96
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	28.66	31.74

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287VPL1
InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU7Hr1G023530	EnsemblPlants:HORVU7Hr1G023530.2
InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF16
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B471FB4	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287VPL1]

Coordinates

chrchr7H:-:36563987..36576148

Molecular Weight (calculated)

53554.8 Da

IEP (calculated)

8.708

GRAVY (calculated)

0.082

Length

485 amino acids

Sequence
(BLAST)

001: RRLVCPLPHL VSVTMLLVIS SLVVTTLLSM RSVDGLLHNA HDIMTVSLAA CSLAAAYTYG SSWSRSVFLV DFAGYKPASA HERTRAKTIH HYGQCGVFTA
101: ESMAFQKRIL ERSGIGNATH FPESVMTVPT DRCLRTANEE SHAVVFGVID ELLAKTRVRP IDIGVVIVNS SLYSPSPSLT SLIVNRYVLR NDVVTHNLSG
201: MGCSAGIIAI DLAKRLLQVY IDTYALVVST ENITLNAYTG NYRPMLVTNL LFRMGGAAIF LSNRHDERRR AKYELIDTVR THRGVSNQSY ACVTQEEDEA
301: GHLGVSLSKD LMVVAAEALR ANITTLGRHV LPISEQLRFI CAVVVKRGFG KKGRSYIPDF TLSLQHFCIH AGGRSVLDEL EKSLNLSEWH MEPSRMTLYR
401: FGNTSSSSLW YELAYCEAKG RITRGDHVLQ IAFGSGFKCN SAVWKALRTV QGCSATKDSS PWSQDVNVLP VLLPRLMPII DDDAL

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.