Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G008100.1 | Wheat | plasma membrane | 83.26 | 89.49 |
| Zm00001d045660_P001 | Maize | mitochondrion | 53.48 | 84.54 |
| EER89559 | Sorghum | mitochondrion, plasma membrane | 78.04 | 73.27 |
| Os06t0262800-01 | Rice | plasma membrane | 77.83 | 72.47 |
| HORVU6Hr1G073300.1 | Barley | golgi, plasma membrane | 71.74 | 68.18 |
| HORVU7Hr1G006910.1 | Barley | plasma membrane | 70.22 | 66.32 |
| HORVU1Hr1G086760.1 | Barley | cytosol | 68.7 | 62.57 |
| HORVU3Hr1G097570.1 | Barley | golgi | 64.13 | 60.33 |
| HORVU6Hr1G082270.1 | Barley | golgi | 64.13 | 57.62 |
| HORVU6Hr1G094160.2 | Barley | endoplasmic reticulum, golgi, plasma membrane | 60.65 | 56.94 |
| KRH35956 | Soybean | plasma membrane | 61.3 | 56.85 |
| HORVU7Hr1G042040.1 | Barley | golgi | 61.09 | 56.65 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 61.09 | 56.65 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 47.61 | 56.3 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 60.65 | 56.25 |
| PGSC0003DMT400037757 | Potato | plastid | 56.3 | 56.18 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 59.78 | 55.89 |
| HORVU7Hr1G042050.1 | Barley | golgi | 59.13 | 55.85 |
| HORVU7Hr1G023540.1 | Barley | mitochondrion | 34.57 | 55.79 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 59.78 | 55.44 |
| HORVU4Hr1G067340.2 | Barley | golgi | 60.22 | 55.29 |
| Bra004034.1-P | Field mustard | plasma membrane | 58.91 | 55.08 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 59.35 | 55.04 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 59.35 | 55.04 |
| CDY42109 | Canola | plasma membrane | 59.35 | 54.93 |
| Bra024749.1-P | Field mustard | plasma membrane | 59.35 | 54.93 |
| CDY04232 | Canola | plasma membrane | 59.13 | 54.73 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 58.91 | 54.64 |
| Solyc02g063140.2.1 | Tomato | golgi | 58.91 | 54.64 |
| AT1G68530.1 | Thale cress | plasma membrane | 58.91 | 54.53 |
| CDY07381 | Canola | plasma membrane | 58.91 | 54.53 |
| HORVU6Hr1G004830.1 | Barley | golgi | 58.7 | 54.44 |
| AT1G25450.1 | Thale cress | plasma membrane | 58.04 | 54.27 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 56.96 | 53.04 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 56.52 | 52.63 |
| HORVU7Hr1G023280.1 | Barley | plasma membrane | 51.3 | 52.21 |
| HORVU2Hr1G112840.1 | Barley | endoplasmic reticulum, golgi | 53.04 | 52.14 |
| HORVU7Hr1G022720.1 | Barley | plasma membrane | 40.43 | 51.81 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 54.57 | 51.02 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 46.52 | 50.95 |
| HORVU7Hr1G030880.1 | Barley | plasma membrane | 53.91 | 49.7 |
| HORVU5Hr1G122360.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 52.83 | 49.19 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 57.17 | 49.07 |
| HORVU5Hr1G087530.1 | Barley | plasma membrane | 51.74 | 48.97 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 55.0 | 48.75 |
| HORVU7Hr1G022580.1 | Barley | golgi, mitochondrion | 38.48 | 48.49 |
| HORVU7Hr1G022780.1 | Barley | golgi, mitochondrion | 49.57 | 48.1 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 50.65 | 44.98 |
| HORVU4Hr1G073840.2 | Barley | golgi | 48.26 | 43.61 |
| HORVU7Hr1G023530.2 | Barley | endoplasmic reticulum, extracellular | 44.13 | 41.86 |
| HORVU1Hr1G089710.3 | Barley | plastid | 51.74 | 40.41 |
| HORVU4Hr1G063420.1 | Barley | peroxisome | 47.83 | 40.37 |
| HORVU6Hr1G036950.5 | Barley | cytosol, peroxisome | 49.35 | 39.34 |
| HORVU7Hr1G084610.6 | Barley | cytosol, mitochondrion, plastid | 49.57 | 38.0 |
| HORVU4Hr1G076940.1 | Barley | mitochondrion, peroxisome, plastid | 29.78 | 31.28 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | UniProt:A0A287ECA3 |
| InterPro:ACP_syn_III_C | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:HORVU0Hr1G038430 | EnsemblPlants:HORVU0Hr1G038430.1 | InterPro:IPR016039 |
| PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF18 | SUPFAM:SSF53901 |
| InterPro:Thiolase-like | UniParc:UPI000B469AE0 | : | : | : | : |
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287ECA3]
Coordinates
chrchrUn:-:246941605..246943351
Molecular Weight (calculated)
50655.4 Da
IEP (calculated)
8.302
GRAVY (calculated)
0.086
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTAAAGLIA MVRFGAAELA SRLSELNPAH IFLGCFLPAA TATIYLMLRP RAVYLVDYAG FRTPSNCRVP FATFLEHARQ LPEFNERSIR FMTRLLERSG
101: LGNETCLPPT HHYMGTHKYC TVDAARAEFE LVAFSAVDDL LVKTGIAPDA IDILIVNCSL FCPTPSLVDM IINRYKLRSD IRGMHLAGMG CSAGMISVEL
201: ARNLLQVAPQ GAHALVVSTE TVTPNYYFGT ERAMLLPNCL FRIGGAAALL STSPAKARFR LNHVVRTLTG ADDSSYRCVF QEEDGDGHRG INLSKDLMNI
301: AGNALNANIT AMGPLVLPAM EQLMFAFSFV ARKVISRRVK PYIPDFRTAF EHFCIHAGGR AVIDELQKGL SLSDEQVEAS RMALHRFGNT SSSSLWYELA
401: YIEAKGRMRR GDRVWTIGFG SGFKCNSAAW ECIQPARNAH GPWATSIHTY PVDVPDVLKH
101: LGNETCLPPT HHYMGTHKYC TVDAARAEFE LVAFSAVDDL LVKTGIAPDA IDILIVNCSL FCPTPSLVDM IINRYKLRSD IRGMHLAGMG CSAGMISVEL
201: ARNLLQVAPQ GAHALVVSTE TVTPNYYFGT ERAMLLPNCL FRIGGAAALL STSPAKARFR LNHVVRTLTG ADDSSYRCVF QEEDGDGHRG INLSKDLMNI
301: AGNALNANIT AMGPLVLPAM EQLMFAFSFV ARKVISRRVK PYIPDFRTAF EHFCIHAGGR AVIDELQKGL SLSDEQVEAS RMALHRFGNT SSSSLWYELA
401: YIEAKGRMRR GDRVWTIGFG SGFKCNSAAW ECIQPARNAH GPWATSIHTY PVDVPDVLKH
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.