Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G022720.1 | Barley | plasma membrane | 61.95 | 77.99 |
| EER89567 | Sorghum | endoplasmic reticulum, golgi, plastid | 57.96 | 57.46 |
| HORVU7Hr1G023540.1 | Barley | mitochondrion | 33.85 | 53.68 |
| HORVU0Hr1G038430.1 | Barley | endoplasmic reticulum, plasma membrane | 52.21 | 51.3 |
| HORVU6Hr1G073300.1 | Barley | golgi, plasma membrane | 53.98 | 50.41 |
| HORVU7Hr1G006910.1 | Barley | plasma membrane | 53.76 | 49.9 |
| HORVU2Hr1G112840.1 | Barley | endoplasmic reticulum, golgi | 50.66 | 48.93 |
| HORVU7Hr1G042050.1 | Barley | golgi | 51.55 | 47.84 |
| HORVU6Hr1G094160.2 | Barley | endoplasmic reticulum, golgi, plasma membrane | 51.77 | 47.76 |
| PGSC0003DMT400037757 | Potato | plastid | 48.67 | 47.72 |
| HORVU1Hr1G086760.1 | Barley | cytosol | 52.88 | 47.33 |
| HORVU3Hr1G097570.1 | Barley | golgi | 51.11 | 47.24 |
| HORVU7Hr1G042040.1 | Barley | golgi | 51.77 | 47.18 |
| HORVU6Hr1G004830.1 | Barley | golgi | 51.77 | 47.18 |
| KRH35956 | Soybean | plasma membrane | 50.66 | 46.17 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 50.44 | 45.97 |
| HORVU7Hr1G022780.1 | Barley | golgi, mitochondrion | 48.01 | 45.78 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 39.38 | 45.76 |
| Bra004034.1-P | Field mustard | plasma membrane | 49.78 | 45.73 |
| HORVU4Hr1G067340.2 | Barley | golgi | 50.66 | 45.71 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 49.78 | 45.36 |
| HORVU6Hr1G082270.1 | Barley | golgi | 51.33 | 45.31 |
| CDY04232 | Canola | plasma membrane | 49.78 | 45.27 |
| CDY07381 | Canola | plasma membrane | 49.78 | 45.27 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 42.04 | 45.24 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 49.56 | 45.16 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 49.56 | 45.16 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 49.12 | 45.12 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 49.12 | 44.76 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 48.89 | 44.74 |
| Solyc02g063140.2.1 | Tomato | golgi | 48.89 | 44.56 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 48.89 | 44.56 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 48.67 | 44.53 |
| AT1G25450.1 | Thale cress | plasma membrane | 48.45 | 44.51 |
| CDY42109 | Canola | plasma membrane | 48.67 | 44.27 |
| Bra024749.1-P | Field mustard | plasma membrane | 48.67 | 44.27 |
| AT1G68530.1 | Thale cress | plasma membrane | 48.45 | 44.06 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 47.35 | 43.5 |
| HORVU7Hr1G030880.1 | Barley | plasma membrane | 47.79 | 43.29 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 48.23 | 42.0 |
| HORVU7Hr1G022580.1 | Barley | golgi, mitochondrion | 33.63 | 41.64 |
| HORVU5Hr1G087530.1 | Barley | plasma membrane | 44.47 | 41.36 |
| HORVU5Hr1G122360.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 44.03 | 40.28 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 47.57 | 40.11 |
| HORVU4Hr1G073840.2 | Barley | golgi | 44.47 | 39.49 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 45.13 | 39.38 |
| HORVU4Hr1G063420.1 | Barley | peroxisome | 45.35 | 37.61 |
| HORVU7Hr1G023530.2 | Barley | endoplasmic reticulum, extracellular | 39.82 | 37.11 |
| HORVU6Hr1G036950.5 | Barley | cytosol, peroxisome | 45.35 | 35.53 |
| HORVU7Hr1G084610.6 | Barley | cytosol, mitochondrion, plastid | 46.02 | 34.67 |
| HORVU1Hr1G089710.3 | Barley | plastid | 44.69 | 34.3 |
| HORVU4Hr1G076940.1 | Barley | mitochondrion, peroxisome, plastid | 27.65 | 28.54 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | UniProt:A0A287VPN0 |
| InterPro:ACP_syn_III_C | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:HORVU7Hr1G023280 | EnsemblPlants:HORVU7Hr1G023280.1 |
| InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF12 |
| SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000B4841F0 | : | : |
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287VPN0]
Coordinates
chrchr7H:-:35107616..35109409
Molecular Weight (calculated)
50689.2 Da
IEP (calculated)
7.326
GRAVY (calculated)
0.029
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLDDLFFI WHGASAHTRL LMLFLCVSTV TTLLYVMSRS RTVYIVDYAC YRPNSKYRIS KDAWIENIHH SWSYDDNSNH CFLARISERS GLGDETYLPS
101: CHHHIPPYNC LSEARVEAEL SIFTTIDDLL VKTSINLDAI AILIVNCSLF NTTPSLADMI MQRYRLRENI CSVQLSGMGC SAGLIAVGLA KDLLQNAPSN
201: AHALVVSTEI LTGTYYTGRK REMQLTDMLF RMGGSAVLLS TSSSNARFEL AHVIRNCTSS DDNAYQCVFY EEDDEGILGL NLSKNLVHVA GKALEDNITM
301: VGPLILPLSV KIAFSLSFIS QKVRYGTTKP CLPDFRKAFD HLCIHAGGRA VIDAVQHSLC LLDEHVEPSR MTLHKFGNTS SSSVWYELAY SEVKGRMSKG
401: DRVWMIGFGS GYKCNSVVLN CIQPAKYADK AWRGCIYRYP IDVPKEVYNM VR
101: CHHHIPPYNC LSEARVEAEL SIFTTIDDLL VKTSINLDAI AILIVNCSLF NTTPSLADMI MQRYRLRENI CSVQLSGMGC SAGLIAVGLA KDLLQNAPSN
201: AHALVVSTEI LTGTYYTGRK REMQLTDMLF RMGGSAVLLS TSSSNARFEL AHVIRNCTSS DDNAYQCVFY EEDDEGILGL NLSKNLVHVA GKALEDNITM
301: VGPLILPLSV KIAFSLSFIS QKVRYGTTKP CLPDFRKAFD HLCIHAGGRA VIDAVQHSLC LLDEHVEPSR MTLHKFGNTS SSSVWYELAY SEVKGRMSKG
401: DRVWMIGFGS GYKCNSVVLN CIQPAKYADK AWRGCIYRYP IDVPKEVYNM VR
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.