Factsheet for HORVU4Hr1G076940.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G296400.1	Wheat	cytosol, peroxisome, plasma membrane	90.18	73.15
TraesCS4B01G297500.1	Wheat	golgi	90.18	73.15
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	89.95	72.96
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	86.53	69.8
Os03t0181500-01	Rice	plasma membrane	86.07	69.56
Zm00001d027904_P001	Maize	plastid	86.07	69.43
GSMUA_Achr3P02010_001	Banana	golgi, peroxisome, plastid	64.38	63.23
GSMUA_Achr6P11690_001	Banana	cytosol, peroxisome, plastid	70.09	63.04
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	62.1	60.99
KRH61616	Soybean	nucleus	67.35	55.04
KRH52284	Soybean	nucleus	66.89	54.77
CDX77038	Canola	cytosol, endoplasmic reticulum, plasma membrane	66.44	54.7
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	65.3	53.96
CDY35309	Canola	cytosol, endoplasmic reticulum, plasma membrane	67.12	53.55
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	67.12	53.45
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	66.67	53.38
CDY11498	Canola	endoplasmic reticulum, peroxisome, plasma membrane	66.67	53.28
CDX76724	Canola	cytosol, endoplasmic reticulum, plasma membrane	66.21	53.02
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	65.3	52.96
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	60.5	52.37
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	62.56	52.19
HORVU1Hr1G090730.1	Barley	peroxisome, plasma membrane, plastid	45.89	38.8
HORVU4Hr1G067340.2	Barley	golgi	42.92	37.52
HORVU1Hr1G089710.3	Barley	plastid	49.77	37.01
HORVU4Hr1G063420.1	Barley	peroxisome	44.06	35.41
HORVU6Hr1G036950.5	Barley	cytosol, peroxisome	45.66	34.66
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	28.31	33.97
HORVU7Hr1G084610.6	Barley	cytosol, mitochondrion, plastid	45.21	33.0
HORVU7Hr1G022720.1	Barley	plasma membrane	26.48	32.31
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	34.7	31.41
HORVU4Hr1G073840.2	Barley	golgi	35.62	30.65
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	31.28	29.78
HORVU3Hr1G097570.1	Barley	golgi	32.65	29.24
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	32.65	29.18
HORVU1Hr1G086760.1	Barley	cytosol	33.56	29.11
HORVU6Hr1G082270.1	Barley	golgi	33.79	28.91
HORVU6Hr1G004830.1	Barley	golgi	32.65	28.83
HORVU7Hr1G023530.2	Barley	endoplasmic reticulum, extracellular	31.74	28.66
HORVU7Hr1G042040.1	Barley	golgi	32.42	28.63
HORVU7Hr1G006910.1	Barley	plasma membrane	30.82	27.72
HORVU7Hr1G023280.1	Barley	plasma membrane	28.54	27.65
HORVU7Hr1G042050.1	Barley	golgi	30.59	27.52
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	27.85	26.07
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	27.4	25.32
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	30.14	24.63
HORVU7Hr1G030880.1	Barley	plasma membrane	27.85	24.45
HORVU5Hr1G087530.1	Barley	plasma membrane	26.94	24.28
HORVU7Hr1G023540.1	Barley	mitochondrion	15.53	23.86
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	26.48	23.48

Protein Annotations

KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	UniProt:A0A287PR10	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006629	GO:GO:0006633	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009409	GO:GO:0009416	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0080167	EnsemblPlantsGene:HORVU4Hr1G076940
EnsemblPlants:HORVU4Hr1G076940.1	InterPro:IPR016039	PFAM:PF08392	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF2
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B46CEAC	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287PR10]

Coordinates

chrchr4H:-:602036645..602040679

Molecular Weight (calculated)

48306.4 Da

IEP (calculated)

9.883

GRAVY (calculated)

-0.113

Length

438 amino acids

Sequence
(BLAST)

001: PPTSPARQAA TQLRPAMARE ELSTEIVNRG VEPSGPDAGS PTFSVRVRRR LPDFLQSVNL KYVRLGYHYL LSHGVYLATI PVIVLVCGAE VGSLSRDELW
101: RKVWDEATYD LATVLAFLAV LAFTISVYIM SRPRPIYLID FATYKPADEL KVSKAEFIDL ARKSGKFDEE SLAFQARLLA KSGIGDESYM PRCVFQPDAN
201: CATMKEGRAE ASAAMFAALD ELFDKCRVRP KDVGVLVVNC SLFNPTPSLS AMIVNHYKMR GNILSYNLGG MGCSAGVISI DLARDMLQAS GAGLAVVVST
301: EAVSFTWYAG KRRSMLIPNA FFRAGAAAVL LSNRRRDFRR AKYQLEHVVR THKGADDRAF RSVYQEEDEQ RIKGLSISRD LVEVGGHALK TNITTLAGLH
401: RPVPGAHGRL RPDRSRQAGA CTMQVLIIKR DTSPHPRG

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.