Factsheet for Bra034298.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35309	Canola	cytosol, endoplasmic reticulum, plasma membrane	99.81	95.45
CDX77038	Canola	cytosol, endoplasmic reticulum, plasma membrane	95.62	94.36
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	96.0	91.64
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	95.43	91.59
VIT_04s0008g02250.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	76.76	76.04
KRH61616	Soybean	nucleus	76.95	75.37
KRH52284	Soybean	nucleus	76.76	75.33
GSMUA_Achr6P11690_001	Banana	cytosol, peroxisome, plastid	68.38	73.72
GSMUA_Achr3P02010_001	Banana	golgi, peroxisome, plastid	60.57	71.3
PGSC0003DMT400019063	Potato	cytosol, peroxisome, plasma membrane	72.95	70.93
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	68.19	70.75
Os03t0181500-01	Rice	plasma membrane	69.9	67.71
EER95395	Sorghum	cytosol, peroxisome, plasma membrane	69.71	67.4
Zm00001d027904_P001	Maize	plastid	69.71	67.4
TraesCS4D01G296400.1	Wheat	cytosol, peroxisome, plasma membrane	69.14	67.22
TraesCS4A01G007400.1	Wheat	cytosol, peroxisome, plasma membrane	69.14	67.22
TraesCS4B01G297500.1	Wheat	golgi	69.14	67.22
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	56.19	66.14
HORVU4Hr1G076940.1	Barley	mitochondrion, peroxisome, plastid	52.19	62.56
Bra025738.1-P	Field mustard	plasma membrane	53.71	55.73
Bra031081.1-P	Field mustard	plasma membrane	53.9	55.38
Bra004034.1-P	Field mustard	plasma membrane	50.48	53.86
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	52.95	53.77
Bra034634.1-P	Field mustard	golgi	48.38	53.59
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	46.48	53.51
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.05	52.86
Bra024749.1-P	Field mustard	plasma membrane	48.76	51.51
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	51.24	51.14
Bra035992.1-P	Field mustard	plasma membrane	50.86	50.76
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	50.86	50.47
Bra032621.1-P	Field mustard	plasma membrane	46.86	50.1
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	41.52	47.29
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	43.43	46.82
Bra017641.1-P	Field mustard	golgi	42.29	46.06
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	42.48	44.07
Bra020664.1-P	Field mustard	plastid	35.24	41.76
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	34.86	40.76
Bra003934.1-P	Field mustard	plasma membrane	35.05	24.63

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C	EnsemblPlantsGene:Bra034298
EnsemblPlants:Bra034298.1	EnsemblPlants:Bra034298.1-P	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
UniProt:M4EZQ5	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF2
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00025452B3	SEG:seg	:

Description

AT2G26250 (E=2e-204) FDH, KCS10 | KCS10 (3-KETOACYL-COA SYNTHASE 10); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA04:-:11727044..11729376

Molecular Weight (calculated)

59000.2 Da

IEP (calculated)

9.449

GRAVY (calculated)

-0.143

Length

525 amino acids

Sequence
(BLAST)

001: MSRSTEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFSAEVG SLSREEIWKK LWDYDLATVI
101: GFFGVFVLTV CVYFMSRPRS VYLIDFACFK PSDELKKRIL QASGIGDETY VPRSISSSEN ITTMKEGREE ASMMIFGALD ELFEKTRVKP KDVGVLVVNC
201: SIFNPTPSLS AMVINHYKMR GNILSYNLGG MGCSAGIIAV DLARDMLQSN PNSYAVVVST EMVGYNWYVG RDKSMVIPNC FFRMGCSAVM LSNRRRDFRH
301: AKYRLEHIVR THKAADDRSF RSVYQEEDEQ GFKGLKISRD LMEVGGEALK TNITTLGPLV LPFSEQLLFF AALIRRTFSP AAKTTTTTSS SATAKINGAK
401: SSSSSDLSKP YIPDYKLAFE HFCFHAASKA VLEELQKNLG LSDENMEASK MTLHRFGNTS SSGIWYELAY MEAKESVRRG DRVWQIAFGS GFKCNSVVWK
501: AMRKVKKPAR NNPWVDCIDR YPVAL

Best Arabidopsis Sequence Match ( AT2G26250.1 )
(BLAST)

001: MGRSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN HAVYLATIPV LVLVFSAEVG SLSREEIWKK LWDYDLATVI
101: GFFGVFVLTA CVYFMSRPRS VYLIDFACYK PSDEHKVTKE EFIELARKSG KFDEETLGFK KRILQASGIG DETYVPRSIS SSENITTMKE GREEASTVIF
201: GALDELFEKT RVKPKDVGVL VVNCSIFNPT PSLSAMVINH YKMRGNILSY NLGGMGCSAG IIAIDLARDM LQSNPNSYAV VVSTEMVGYN WYVGSDKSMV
301: IPNCFFRMGC SAVMLSNRRR DFRHAKYRLE HIVRTHKAAD DRSFRSVYQE EDEQGFKGLK ISRDLMEVGG EALKTNITTL GPLVLPFSEQ LLFFAALLRR
401: TFSPAAKTST TTSFSTSATA KTNGIKSSSS DLSKPYIPDY KLAFEHFCFH AASKVVLEEL QKNLGLSEEN MEASRMTLHR FGNTSSSGIW YELAYMEAKE
501: SVRRGDRVWQ IAFGSGFKCN SVVWKAMRKV KKPTRNNPWV DCINRYPVPL

Arabidopsis Description

FDH3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VYA3]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.