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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 3
  • endoplasmic reticulum 3
  • cytosol 1
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 98.44 98.44
AT1G71160.1 Thale cress endoplasmic reticulum, plasma membrane 87.75 85.65
VIT_12s0034g01840.t01 Wine grape endoplasmic reticulum, golgi 61.47 60.13
KRH10421 Soybean endoplasmic reticulum, plasma membrane 60.58 59.26
Bra003934.1-P Field mustard plasma membrane 85.3 51.27
Bra020664.1-P Field mustard plastid 46.77 47.4
Bra004034.1-P Field mustard plasma membrane 49.0 44.72
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 45.88 44.69
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 45.21 44.52
Bra024749.1-P Field mustard plasma membrane 48.55 43.86
Bra034634.1-P Field mustard golgi 45.66 43.25
Bra017641.1-P Field mustard golgi 46.33 43.15
Bra025738.1-P Field mustard plasma membrane 46.99 41.7
Bra031081.1-P Field mustard plasma membrane 47.22 41.49
Bra033694.1-P Field mustard golgi, peroxisome, plastid 47.22 40.3
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 45.43 40.24
Bra035992.1-P Field mustard plasma membrane 46.77 39.92
Bra009413.1-P Field mustard cytosol, golgi, plasma membrane 45.88 39.85
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 44.77 39.72
Bra013081.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 42.98 39.63
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 46.1 39.13
Bra032621.1-P Field mustard plasma membrane 42.76 39.1
Bra007766.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 42.98 35.28
Bra034298.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 40.76 34.86
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra007966EnsemblPlants:Bra007966.1EnsemblPlants:Bra007966.1-PInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747
InterPro:IPR016039UniProt:M4CUS1PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF20SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002546C30SEG:seg
Description
AT1G71160 (E=2e-222) KCS7 | KCS7 (3-KETOACYL-COA SYNTHASE 7); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups
Coordinates
chrA02:-:12155481..12156830
Molecular Weight (calculated)
50038.2 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.109
Length
449 amino acids
Sequence
(BLAST)
001: MDSSSPFINV SQTFMSFPHV ASAFVVIAVF SYYFFRPKCI YLIDFSCYQP PDFLRATVSN FIEHLTISGV FDQESLDLQQ KILERSGIGD GASVPVTVHE
101: IPPNSSLSAA REETHDILFT VVEDLFLKHK IDPKSIDILV SNCSLFCPSP SITSIIINRF GMRSDIKSFS LSGMGCSAGL LSINLVKDLM KIHGDSLALV
201: LSMEAVSPNG YRGKCKSMLI ANTIFRMGGA AILLSNREQD KPNAKYKLQH LIRTHVGSDN ESYESVMQQI DEEGNVGVAL SKQLVKVASK ALKINVVELG
301: PQVLPYSEQL KYIVSFIKRK WGMQKEVYTP NFKKAFEHFC IHAGGRAIID GVEKHLKLDK EDVEASRSTL HRYGNTSSSS LWYELQYLEA KGRMKKGDRV
401: WQIGFGSGFK ANTAVWKCIS EIDSKDRNAW SDRIHLYPVS GDGSSALET
Best Arabidopsis Sequence Match ( AT1G71160.1 )
(BLAST)
001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS
Arabidopsis Description
KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.