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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 91.38 100.0
CDY10355 Canola cytosol 52.98 100.0
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 70.43 67.79
Bra037304.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 60.78 64.91
KRH51526 Soybean plasma membrane 57.91 63.66
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 59.55 62.91
Bra001974.1-P Field mustard cytosol, peroxisome, plasma membrane 65.09 62.52
Bra017641.1-P Field mustard golgi 61.6 62.24
Bra034634.1-P Field mustard golgi 60.16 61.81
VIT_03s0063g02640.t01 Wine grape plasma membrane 63.66 61.51
Bra031081.1-P Field mustard plasma membrane 62.63 59.69
Bra025738.1-P Field mustard plasma membrane 62.01 59.68
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 50.92 59.19
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 50.92 58.77
Os05t0568000-02 Rice plasma membrane 60.57 57.39
Zm00001d009608_P001 Maize plasma membrane 59.34 57.23
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 54.0 56.93
Zm00001d039053_P001 Maize plasma membrane 59.55 56.42
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 59.75 55.96
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 53.39 55.2
TraesCS1A01G406200.1 Wheat plasma membrane 58.73 54.79
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 58.93 54.67
TraesCS1D01G414600.1 Wheat peroxisome 58.93 54.67
Bra009413.1-P Field mustard cytosol, golgi, plasma membrane 57.08 53.77
Bra004034.1-P Field mustard plasma membrane 52.98 52.44
Bra024749.1-P Field mustard plasma membrane 52.36 51.31
Bra033694.1-P Field mustard golgi, peroxisome, plastid 55.24 51.14
Bra035992.1-P Field mustard plasma membrane 55.03 50.95
Bra015296.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 55.03 50.66
HORVU1Hr1G089710.3 Barley plastid 58.93 48.73
Bra032621.1-P Field mustard plasma membrane 46.41 46.03
Bra020664.1-P Field mustard plastid 39.84 43.79
Bra034298.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 46.82 43.43
Bra007766.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 48.46 43.14
Bra007966.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 39.63 42.98
Bra003934.1-P Field mustard plasma membrane 39.01 25.44
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra013081EnsemblPlants:Bra013081.1EnsemblPlants:Bra013081.1-PInterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747
InterPro:IPR016039UniProt:M4D9C1PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF65SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI0002540AE0:
Description
AT4G34520 (E=2e-205) FAE1, KCS18 | KCS18; acyltransferase/ fatty acid elongase
Coordinates
chrA03:+:20567920..20569383
Molecular Weight (calculated)
54817.4 Da
IEP (calculated)
9.627
GRAVY (calculated)
-0.139
Length
487 amino acids
Sequence
(BLAST)
001: MANVKLLYHY LITHFFKLFF LPLIALVATK ASSLTQEDFH NLWFHLQHNL QTLTIVFAIF TFGSTVYILT RPRPVYLVDY SCHLPPAHQK ITVQMIRDNI
101: KKNLEINPSL RLLGEESSLD FFYRVLERSG LGEETYLPNA LHSVPPLQNM AAAREETEQV IFDAIDNLLT NTKVNTREIG IIILNSSTFN PTPSLSAMVV
201: NKYKLRSNIK SINLGGMGCS AGVIAIDLAK DLLQVHKNTY ALVVSTENIS RNAYAGDNKS MIVANCLFRL GGAAILLSNK SEDRRRSKYK LLHTVRTHTG
301: ADDKSFRCVQ QEDDDKGKTG ISLTKDITSV AGRTITKNIA TLGPLVLPMS EKLLFFKTYL RKKYFDDKIK HYVPDFKRAI DHFCIHAGGR ALIDELEKSL
401: GLSPVDVEPS RSTLHRFGNT SSSSIWYELA YTEAKGRMKK GNKAWQIALG SGFKCNSAVW VALRDVNPSV NSPWEHCIDK YPVKLDL
Best Arabidopsis Sequence Match ( AT4G34520.1 )
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Arabidopsis Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.