Factsheet for Bra020664.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33931	Canola	plastid	97.97	94.97
AT5G49070.1	Thale cress	plasma membrane, vacuole	85.33	81.47
VIT_10s0042g01230.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	55.98	55.36
KRH12070	Soybean	endoplasmic reticulum, golgi	52.37	52.85
Bra007966.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	47.4	46.77
Bra004034.1-P	Field mustard	plasma membrane	50.79	45.73
Bra024749.1-P	Field mustard	plasma membrane	49.44	44.06
Bra037304.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	44.47	43.2
Bra036405.1-P	Field mustard	cytosol, plasma membrane, plastid	44.02	42.3
Bra034634.1-P	Field mustard	golgi	43.12	40.3
Bra013081.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	43.79	39.84
Bra035992.1-P	Field mustard	plasma membrane	46.95	39.54
Bra033694.1-P	Field mustard	golgi, peroxisome, plastid	46.95	39.54
Bra017641.1-P	Field mustard	golgi	42.89	39.42
Bra025738.1-P	Field mustard	plasma membrane	44.92	39.33
Bra015296.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	46.95	39.32
Bra009413.1-P	Field mustard	cytosol, golgi, plasma membrane	45.6	39.07
Bra031081.1-P	Field mustard	plasma membrane	44.47	38.55
Bra034635.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	43.79	38.34
Bra001974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.57	38.07
Bra032621.1-P	Field mustard	plasma membrane	41.53	37.47
Bra034298.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	41.76	35.24
Bra007766.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	42.89	34.73
Bra003934.1-P	Field mustard	plasma membrane	47.4	28.11

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
EnsemblPlantsGene:Bra020664	EnsemblPlants:Bra020664.1	EnsemblPlants:Bra020664.1-P	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	UniProt:M4DVX0	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF6	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI0002546502	SEG:seg

Description

AT5G49070 (E=1e-202) KCS21 | KCS21 (3-KETOACYL-COA SYNTHASE 21); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA02:-:23859315..23860646

Molecular Weight (calculated)

50027.9 Da

IEP (calculated)

9.241

GRAVY (calculated)

-0.093

Length

443 amino acids

Sequence
(BLAST)

001: MSELTTLLSS SGSILKIFIS LLVFHLVYQR LRRRVKVYLL DFTCYRAPDS NRLPMSTLLE TIYLANQIDQ ESIDFQARIL ERSWLSNQTS IPPSLTEIPL
101: KKSLTSVQTE TMTTIFTSVE DLLKKNKLSP RNIDILITNC SLHAPTPSLS AMVINKFHMR SNIKSFSLSG MGCAAGILSV SLANDLLKVH KGSLALIVST
201: EALNTHWYIG KDRSMLLTNC LFRMGAAAVL MSSNEQDRGN AKYELLHVVR TNKAKDDRAY RCIYQDIDSE LKQGVSITKD VITVAGDVLK MNLTTLGPLV
301: LPYLELLQYV IRKIYKPSSS YRPNFKKAFE HFCIHTGGRA VIQAMEMNLN LTEEDIEPSK MTLHRFGNTS SSSVWYALSY LEAKRRVKRG DKVLQIAFGS
401: GFKCNSAVWR CIRELEPDTD NKWLDSIESY PVDVPDSISI RPC

Best Arabidopsis Sequence Match ( AT5G49070.1 )
(BLAST)

001: MNQTIHRVSP ISMSISELTT LLSSGVSVFE IFAGLLVVHL IYQRIRTRVK VYLLDFTCYR APDSNRVPMS TLIETIYLDD KLDQESIDFQ ARILERSWLS
101: NQTSIPRSLM EIPLKKSLSS VKIETMTTIF TSVEDLLRKN KLSPRSIDIL ITNCSLHSPS PSLSAMVINK FHMRSNIKSF NLSGMGCAAG ILSVNLANDL
201: LQAHRGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDH DRDNAKYELL HVVRKNKAKD DRAYRCIYQD IDSDEKQGVS ITKDVISVAG
301: DMLKMNLTSL GPLVLPYLEQ FQYVIQHILC KKLKIYESNS SYTPNFKTAF EHFCIHTGGR AVIQAMEMNL KLTKVDIEPS KMTLHRFGNT SSSSIWYALS
401: YLEAKRRMKK GDRVLQIAFG SGFKCNSAVW RCIRKVEPNT ENKWLDFIDS YPVDVPDSTN IRPG

Arabidopsis Description

KCS21Probable 3-ketoacyl-CoA synthase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH27]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.