Factsheet for AT5G49070.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33931	Canola	plastid	84.7	86.0
CDY05644	Canola	plasma membrane, plastid, vacuole	84.48	85.78
Bra020664.1-P	Field mustard	plastid	81.47	85.33
VIT_10s0042g01230.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	55.82	57.81
KRH12070	Soybean	endoplasmic reticulum, golgi	50.86	53.76
AT1G71160.1	Thale cress	endoplasmic reticulum, plasma membrane	45.91	46.3
AT1G25450.1	Thale cress	plasma membrane	46.77	44.11
AT1G68530.1	Thale cress	plasma membrane	46.98	43.86
AT4G34510.1	Thale cress	plasma membrane	44.83	42.71
AT2G15090.1	Thale cress	golgi	43.97	42.41
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	41.81	41.63
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	43.97	41.38
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	40.73	41.18
AT2G26640.1	Thale cress	plasma membrane	43.75	39.88
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	43.97	39.53
AT2G16280.1	Thale cress	golgi, peroxisome, plasma membrane	43.53	39.45
AT1G04220.1	Thale cress	plasma membrane	44.4	39.02
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	44.18	38.75
AT4G34520.1	Thale cress	golgi	42.03	38.54
AT1G01120.1	Thale cress	plasma membrane	43.32	38.07
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	41.59	35.09

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:834966
UniProt:A0A178UBW3	InterPro:ACP_syn_III_C	ProteinID:AED95768.1	ArrayExpress:AT5G49070	EnsemblPlantsGene:AT5G49070	RefSeq:AT5G49070
TAIR:AT5G49070	RefSeq:AT5G49070-TAIR-G	EnsemblPlants:AT5G49070.1	TAIR:AT5G49070.1	Unigene:At.65660	ProteinID:BAB10089.1
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0102336	GO:GO:0102337	GO:GO:0102338
GO:GO:0102756	InterPro:IPR016039	Symbol:KCS21	RefSeq:NP_199718.1	ProteinID:OAO91160.1	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PO:PO:0000013	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020038	PO:PO:0025022
PANTHER:PTHR31561	PANTHER:PTHR31561:SF6	UniProt:Q9FH27	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like
UniParc:UPI0000048C30	:	:	:	:	:

Description

KCS21Probable 3-ketoacyl-CoA synthase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH27]

Coordinates

chr5:-:19888751..19890145

Molecular Weight (calculated)

52560.9 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.127

Length

464 amino acids

Sequence
(BLAST)

001: MNQTIHRVSP ISMSISELTT LLSSGVSVFE IFAGLLVVHL IYQRIRTRVK VYLLDFTCYR APDSNRVPMS TLIETIYLDD KLDQESIDFQ ARILERSWLS
101: NQTSIPRSLM EIPLKKSLSS VKIETMTTIF TSVEDLLRKN KLSPRSIDIL ITNCSLHSPS PSLSAMVINK FHMRSNIKSF NLSGMGCAAG ILSVNLANDL
201: LQAHRGSLAL IVSTEALNTH WYIGKDRSML LTNCLFRMGA AAVLMSSNDH DRDNAKYELL HVVRKNKAKD DRAYRCIYQD IDSDEKQGVS ITKDVISVAG
301: DMLKMNLTSL GPLVLPYLEQ FQYVIQHILC KKLKIYESNS SYTPNFKTAF EHFCIHTGGR AVIQAMEMNL KLTKVDIEPS KMTLHRFGNT SSSSIWYALS
401: YLEAKRRMKK GDRVLQIAFG SGFKCNSAVW RCIRKVEPNT ENKWLDFIDS YPVDVPDSTN IRPG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.