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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 78.3 83.19
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 78.3 83.19
CDX72475 Canola endoplasmic reticulum, golgi 70.79 82.51
CDY49290 Canola endoplasmic reticulum, golgi 69.98 81.56
Bra017641.1-P Field mustard golgi 79.51 81.33
AT2G15090.1 Thale cress golgi 73.63 75.47
KRH51526 Soybean plasma membrane 57.4 63.88
AT4G34520.1 Thale cress golgi 64.1 62.45
AT4G34510.1 Thale cress plasma membrane 59.23 59.96
VIT_03s0063g02640.t01 Wine grape plasma membrane 61.05 59.72
AT1G19440.1 Thale cress golgi, peroxisome, plasma membrane 61.26 58.53
Zm00001d009608_P001 Maize plasma membrane 59.63 58.22
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 60.45 58.2
Zm00001d039053_P001 Maize plasma membrane 60.24 57.78
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 53.75 57.36
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 49.09 57.35
Os05t0568000-02 Rice plasma membrane 59.63 57.2
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 60.04 56.92
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 47.87 56.32
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 53.55 56.05
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 59.43 55.81
TraesCS1A01G406200.1 Wheat plasma membrane 59.03 55.75
TraesCS1D01G414600.1 Wheat peroxisome 59.23 55.62
AT2G26640.1 Thale cress plasma membrane 54.16 52.46
AT2G46720.1 Thale cress endoplasmic reticulum, plasma membrane 48.28 51.07
AT1G04220.1 Thale cress plasma membrane 54.56 50.95
AT3G10280.1 Thale cress endoplasmic reticulum, plasma membrane 47.06 50.54
AT5G43760.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 54.16 50.47
AT1G25450.1 Thale cress plasma membrane 49.7 49.8
HORVU1Hr1G089710.3 Barley plastid 59.43 49.75
AT1G68530.1 Thale cress plasma membrane 50.1 49.7
AT1G01120.1 Thale cress plasma membrane 50.91 47.54
AT5G49070.1 Thale cress plasma membrane, vacuole 41.38 43.97
AT1G71160.1 Thale cress endoplasmic reticulum, plasma membrane 40.77 43.7
AT2G26250.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 46.45 41.64
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1EntrezGene:829574
UniProt:A4VCL7InterPro:ACP_syn_III_CProteinID:AEE86348.1EMBL:AK229262ArrayExpress:AT4G34250EnsemblPlantsGene:AT4G34250
RefSeq:AT4G34250TAIR:AT4G34250RefSeq:AT4G34250-TAIR-GEnsemblPlants:AT4G34250.1TAIR:AT4G34250.1EMBL:BT030458
ProteinID:CAB36702.1ProteinID:CAB80142.1InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009416
GO:GO:0009628GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746
GO:GO:0016747GO:GO:0102336GO:GO:0102337GO:GO:0102338GO:GO:0102756InterPro:IPR016039
Symbol:KCS16RefSeq:NP_195151.1PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PO:PO:0000013
PO:PO:0000014PO:PO:0000037PO:PO:0000293PO:PO:0001054PO:PO:0001185PO:PO:0007064
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009025PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0020137
PO:PO:0025022PANTHER:PTHR31561PANTHER:PTHR31561:SF23UniProt:Q9SYZ0SUPFAM:SSF53901TMHMM:TMhelix
InterPro:Thiolase-likeUniParc:UPI00000A4E47SEG:seg:::
Description
KCS163-ketoacyl-CoA synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYZ0]
Coordinates
chr4:+:16394600..16396703
Molecular Weight (calculated)
55780.9 Da
IEP (calculated)
9.080
GRAVY (calculated)
-0.072
Length
493 amino acids
Sequence
(BLAST)
001: MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI
101: MQHVRLVREA GAWKQESDYL MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD IGILVVNSST FNPTPSLSSI
201: LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH
301: TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK
401: NLHLTPLDVE ASRMTLHRFG NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL HKYPVEIDID LKE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.