Factsheet for AT1G01120.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15199	Canola	cytosol	60.98	94.71
Bra032621.1-P	Field mustard	plasma membrane	86.93	93.48
CDY37475	Canola	plasma membrane	84.47	93.31
CDY32443	Canola	plasma membrane	84.28	93.1
CDX90012	Canola	cytosol	91.67	91.49
GSMUA_Achr1P02540_001	Banana	cytosol	51.52	64.15
Os03t0245700-02	Rice	cytosol, peroxisome, plastid	62.88	62.41
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	61.17	60.37
Zm00001d028406_P001	Maize	peroxisome	62.5	60.33
AT2G26640.1	Thale cress	plasma membrane	58.14	60.31
EER91722	Sorghum	peroxisome	60.98	60.19
AT2G46720.1	Thale cress	endoplasmic reticulum, plasma membrane	52.84	59.87
TraesCS4D01G226100.1	Wheat	peroxisome	60.98	59.74
TraesCS4A01G068400.1	Wheat	peroxisome	61.17	59.7
AT3G10280.1	Thale cress	endoplasmic reticulum, plasma membrane	51.89	59.7
HORVU4Hr1G063420.1	Barley	peroxisome	61.55	59.63
KXG39781	Sorghum	peroxisome	61.93	59.56
Zm00001d047931_P001	Maize	peroxisome	61.36	59.34
TraesCS4B01G225500.1	Wheat	peroxisome	60.98	58.97
AT5G43760.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	57.77	57.66
AT1G04220.1	Thale cress	plasma membrane	57.2	57.2
AT1G19440.1	Thale cress	golgi, peroxisome, plasma membrane	55.11	56.4
AT1G25450.1	Thale cress	plasma membrane	51.7	55.49
AT2G16280.1	Thale cress	golgi, peroxisome, plasma membrane	53.79	55.47
AT1G68530.1	Thale cress	plasma membrane	51.89	55.13
AT4G34510.1	Thale cress	plasma membrane	50.57	54.83
AT2G15090.1	Thale cress	golgi	47.54	52.18
AT4G34250.1	Thale cress	endoplasmic reticulum, golgi	47.54	50.91
AT2G26250.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	51.89	49.82
AT4G34520.1	Thale cress	golgi	47.54	49.6
AT1G71160.1	Thale cress	endoplasmic reticulum, plasma membrane	39.02	44.78
AT5G49070.1	Thale cress	plasma membrane, vacuole	38.07	43.32

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	EntrezGene:839395
UniProt:A0A178W124	ProteinID:AAC99312.1	ProteinID:AAF26470.1	InterPro:ACP_syn_III_C	ProteinID:AEE27241.1	EMBL:AK221191
ArrayExpress:AT1G01120	EnsemblPlantsGene:AT1G01120	RefSeq:AT1G01120	TAIR:AT1G01120	RefSeq:AT1G01120-TAIR-G	EnsemblPlants:AT1G01120.1
TAIR:AT1G01120.1	EMBL:AY074285	EMBL:AY096568	Unigene:At.22667	CHEMBL:CHEMBL2242739	InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0005829	GO:GO:0005840	GO:GO:0006629	GO:GO:0006633
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009416
GO:GO:0009628	GO:GO:0009922	GO:GO:0009987	GO:GO:0010025	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	GO:GO:0022626	GO:GO:0102336	GO:GO:0102337
GO:GO:0102338	GO:GO:0102756	InterPro:IPR016039	Symbol:KCS1	RefSeq:NP_171620.2	ProteinID:OAP11784.1
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PO:PO:0000013	PO:PO:0000014	PO:PO:0000037
PO:PO:0000112	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0006504	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0009067	PO:PO:0009073	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0020148	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31561	PANTHER:PTHR31561:SF65
UniProt:Q9MAM3	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI00000A3FBF	SEG:seg

Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]

Coordinates

chr1:-:57164..59215

Molecular Weight (calculated)

59279.8 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.107

Length

528 amino acids

Sequence
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.