Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76287 | Canola | endoplasmic reticulum, golgi, plasma membrane | 85.77 | 85.77 |
| Bra034635.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 85.57 | 85.57 |
| CDY17465 | Canola | plasma membrane | 80.24 | 85.47 |
| KRH51526 | Soybean | plasma membrane | 57.51 | 65.69 |
| AT2G15090.1 | Thale cress | golgi | 61.46 | 64.66 |
| AT4G34250.1 | Thale cress | endoplasmic reticulum, golgi | 62.45 | 64.1 |
| AT2G16280.1 | Thale cress | golgi, peroxisome, plasma membrane | 64.43 | 63.67 |
| AT4G34510.1 | Thale cress | plasma membrane | 61.07 | 63.45 |
| VIT_03s0063g02640.t01 | Wine grape | plasma membrane | 61.86 | 62.1 |
| AT1G19440.1 | Thale cress | golgi, peroxisome, plasma membrane | 61.86 | 60.66 |
| Zm00001d009608_P001 | Maize | plasma membrane | 59.29 | 59.41 |
| GSMUA_Achr5P09090_001 | Banana | golgi, peroxisome, plasma membrane | 48.42 | 58.47 |
| Zm00001d039053_P001 | Maize | plasma membrane | 59.29 | 58.37 |
| Os05t0568000-02 | Rice | plasma membrane | 59.29 | 58.37 |
| GSMUA_Achr6P27270_001 | Banana | cytosol, peroxisome, plasma membrane | 48.62 | 58.29 |
| GSMUA_Achr2P08980_001 | Banana | golgi, peroxisome, plasma membrane | 53.16 | 58.23 |
| EES19964 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 59.49 | 57.88 |
| TraesCS1A01G406200.1 | Wheat | plasma membrane | 58.5 | 56.7 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 58.7 | 56.57 |
| TraesCS1D01G414600.1 | Wheat | peroxisome | 58.7 | 56.57 |
| GSMUA_Achr9P06980_001 | Banana | cytosol, golgi, peroxisome | 52.57 | 56.48 |
| AT2G26640.1 | Thale cress | plasma membrane | 54.74 | 54.42 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 54.15 | 51.8 |
| AT1G68530.1 | Thale cress | plasma membrane | 50.59 | 51.51 |
| AT1G25450.1 | Thale cress | plasma membrane | 49.8 | 51.22 |
| HORVU1Hr1G089710.3 | Barley | plastid | 58.7 | 50.42 |
| AT1G04220.1 | Thale cress | plasma membrane | 52.37 | 50.19 |
| AT3G10280.1 | Thale cress | endoplasmic reticulum, plasma membrane | 45.06 | 49.67 |
| AT2G46720.1 | Thale cress | endoplasmic reticulum, plasma membrane | 45.65 | 49.57 |
| AT1G01120.1 | Thale cress | plasma membrane | 49.6 | 47.54 |
| AT1G71160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 39.33 | 43.26 |
| AT2G26250.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 46.05 | 42.36 |
| AT5G49070.1 | Thale cress | plasma membrane, vacuole | 38.54 | 42.03 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | EntrezGene:829603 |
| UniProt:A0A178UUK5 | ProteinID:AAA70154.1 | InterPro:ACP_syn_III_C | ProteinID:AEE86388.1 | ArrayExpress:AT4G34520 | EnsemblPlantsGene:AT4G34520 |
| RefSeq:AT4G34520 | TAIR:AT4G34520 | RefSeq:AT4G34520-TAIR-G | EnsemblPlants:AT4G34520.1 | TAIR:AT4G34520.1 | Unigene:At.26989 |
| ProteinID:CAA18831.1 | ProteinID:CAB80169.1 | CHEMBL:CHEMBL2242735 | Symbol:FAE1 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009922 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| GO:GO:0031090 | GO:GO:0043231 | GO:GO:0102336 | GO:GO:0102337 | GO:GO:0102338 | GO:GO:0102756 |
| InterPro:IPR016039 | RefSeq:NP_195178.1 | ProteinID:OAO97303.1 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 |
| PO:PO:0000037 | PO:PO:0007611 | PO:PO:0009001 | PO:PO:0009030 | PO:PO:0009047 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF23 | UniProt:Q38860 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI0000047264 |
Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
Coordinates
chr4:+:16494205..16495842
Molecular Weight (calculated)
56267.1 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.052
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.