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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 98.53 92.49
AT4G34520.1 Thale cress golgi 85.47 80.24
CDY10355 Canola cytosol 42.32 77.91
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 62.53 68.91
CDX89699 Canola cytosol 46.95 68.62
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 64.21 68.54
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 51.79 63.24
KRH51526 Soybean plasma membrane 58.53 62.75
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 59.79 61.21
CDX71278 Canola cytosol, peroxisome, plasma membrane 65.05 60.95
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 59.37 60.78
CDY46211 Canola cytosol, peroxisome, plasma membrane 64.84 60.75
VIT_03s0063g02640.t01 Wine grape plasma membrane 64.21 60.52
CDX72475 Canola endoplasmic reticulum, golgi 52.63 59.1
CDY46243 Canola golgi 58.95 59.07
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 59.16 58.91
CDY29431 Canola plasma membrane 60.0 58.88
CDX76286 Canola golgi 58.74 58.86
CDY21665 Canola plasma membrane 62.95 58.63
CDX94721 Canola cytosol 48.63 58.33
CDY49290 Canola endoplasmic reticulum, golgi 51.79 58.16
CDX81929 Canola plasma membrane 62.32 58.04
CDY26665 Canola cytosol, peroxisome, plasma membrane 60.42 57.98
CDY15199 Canola cytosol 41.26 57.65
Zm00001d009608_P001 Maize plasma membrane 60.63 57.03
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 49.89 56.56
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 49.89 56.16
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 54.53 56.06
CDY63070 Canola cytosol 43.37 55.98
Zm00001d039053_P001 Maize plasma membrane 60.0 55.45
Os05t0568000-02 Rice plasma membrane 59.79 55.25
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 60.21 55.0
TraesCS1A01G406200.1 Wheat plasma membrane 60.0 54.6
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 60.21 54.48
TraesCS1D01G414600.1 Wheat peroxisome 60.21 54.48
CDY47458 Canola cytosol 5.68 54.0
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 53.26 53.72
CDX70186 Canola plastid 57.26 53.02
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 52.42 52.75
CDX98800 Canola plastid 57.26 52.51
CDX89834 Canola plasma membrane 54.95 50.1
CDY07381 Canola plasma membrane 52.0 49.7
CDX96912 Canola endoplasmic reticulum, golgi, plastid 54.74 49.34
CDY04232 Canola plasma membrane 51.58 49.3
CDY14892 Canola endoplasmic reticulum, golgi, plastid 54.53 49.24
CDY18212 Canola plasma membrane 54.74 49.15
HORVU1Hr1G089710.3 Barley plastid 60.21 48.56
CDY42109 Canola plasma membrane 50.53 48.29
CDX90012 Canola cytosol 51.37 46.12
CDY37475 Canola plasma membrane 46.32 46.03
CDY32443 Canola plasma membrane 46.11 45.82
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 41.05 43.43
CDY37951 Canola endoplasmic reticulum, plasma membrane 40.84 43.21
CDY49219 Canola endoplasmic reticulum, plasma membrane 41.05 43.05
CDX68323 Canola endoplasmic reticulum, golgi 40.21 42.35
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 46.11 41.17
CDY33931 Canola plastid 39.37 40.92
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 47.16 40.88
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 46.95 40.77
CDY05644 Canola plasma membrane, plastid, vacuole 38.95 40.48
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 46.74 40.44
CDY41551 Canola golgi 48.42 36.57
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 48.84 36.42
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
InterPro:ACP_syn_III_CProteinID:ADB85633.1EnsemblPlants:CDY17465ProteinID:CDY17465ProteinID:CDY17465.1GO:D3JXE5
UniProt:D3JXE5InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00095638001InterPro:IPR016039
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF23MetaCyc:PWY-4381
MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601
MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelix
InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0001C3325E:::
Description
BnaC03g65980D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:D3JXE5]
Coordinates
chrLK032074:+:934..2361
Molecular Weight (calculated)
52941.2 Da
IEP (calculated)
9.737
GRAVY (calculated)
-0.052
Length
475 amino acids
Sequence
(BLAST)
001: MTSINVKLLY HYVITNLFNL CFFPLTAIVA GKAYRLTIDD LHHLYYSYLQ HNLITIAPLF AFTVFGSVLY IATRPKPVYL VEYSCYLPPT HCRSSISKVM
101: DIFYQVRKAD PSRNGTCDDS SWLDFLRKIQ ERSGLGDETH GPEGLLQVPP RKTFAAAREE TEQVIIGALE NLFKNTNVNP KDIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNVRSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITYNIYAG DNRSMMVSNC LFRVGGAAIL LSNKPRDRRR SKYELVHTVR
301: THTGADDKSF RCVQQGDDEN GKTGVSLSKD ITDVAGRTVK KNIATLGPLI LPLSEKLLFF VTFMGKKLFK DKIKHYYVPD FKLAIDHFCI HAGGKAVIDV
401: LEKNLGLAPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKVW QIALGSGFKC NSAVWVALNN VKASK
Best Arabidopsis Sequence Match ( AT4G34520.1 )
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Arabidopsis Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.