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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46211 Canola cytosol, peroxisome, plasma membrane 98.62 98.62
CDX89699 Canola cytosol 60.75 94.77
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 70.81 92.29
CDY47458 Canola cytosol 9.07 92.0
AT2G16280.1 Thale cress golgi, peroxisome, plasma membrane 92.31 91.41
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 79.09 84.96
VIT_03s0063g02640.t01 Wine grape plasma membrane 79.29 79.76
CDX76286 Canola golgi 74.36 79.54
CDY46243 Canola golgi 73.57 78.69
KRH51526 Soybean plasma membrane 68.05 77.88
CDX81929 Canola plasma membrane 77.32 76.86
CDY21665 Canola plasma membrane 77.32 76.86
CDY29431 Canola plasma membrane 72.98 76.45
CDY26665 Canola cytosol, peroxisome, plasma membrane 73.57 75.35
CDY10355 Canola cytosol 38.26 75.19
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 68.24 74.89
Zm00001d009608_P001 Maize plasma membrane 73.96 74.26
Os05t0568000-02 Rice plasma membrane 75.15 74.12
Zm00001d039053_P001 Maize plasma membrane 74.95 73.93
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 74.95 73.08
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 60.55 72.75
TraesCS1A01G406200.1 Wheat plasma membrane 74.16 72.03
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 74.36 71.81
TraesCS1D01G414600.1 Wheat peroxisome 74.36 71.81
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 65.68 70.7
CDX94721 Canola cytosol 53.85 68.94
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 58.78 66.97
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 56.8 66.82
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 55.03 66.59
CDY15199 Canola cytosol 44.38 66.18
CDY17465 Canola plasma membrane 60.95 65.05
HORVU1Hr1G089710.3 Barley plastid 74.16 63.84
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 63.51 63.64
CDY63070 Canola cytosol 46.15 63.59
CDX70186 Canola plastid 63.71 62.96
CDX98800 Canola plastid 63.71 62.36
CDY07381 Canola plasma membrane 60.95 62.17
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 56.61 61.85
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 56.41 61.64
CDY04232 Canola plasma membrane 60.35 61.57
CDX89834 Canola plasma membrane 63.12 61.42
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 57.4 61.01
CDX72475 Canola endoplasmic reticulum, golgi 50.89 60.99
CDY14892 Canola endoplasmic reticulum, golgi, plastid 62.92 60.65
CDY49290 Canola endoplasmic reticulum, golgi 50.49 60.52
CDX96912 Canola endoplasmic reticulum, golgi, plastid 62.72 60.34
CDY18212 Canola plasma membrane 62.72 60.11
CDY42109 Canola plasma membrane 58.78 59.96
CDX90012 Canola cytosol 55.03 52.74
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 54.24 51.69
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 55.03 50.91
CDY37475 Canola plasma membrane 47.93 50.84
CDY32443 Canola plasma membrane 47.93 50.84
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 54.64 50.64
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 54.83 50.64
CDY37951 Canola endoplasmic reticulum, plasma membrane 41.22 46.55
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 40.83 46.1
CDY49219 Canola endoplasmic reticulum, plasma membrane 40.83 45.7
CDX68323 Canola endoplasmic reticulum, golgi 40.24 45.23
CDY33931 Canola plastid 38.26 42.45
CDY05644 Canola plasma membrane, plastid, vacuole 38.26 42.45
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 47.93 38.15
CDY41551 Canola golgi 47.14 38.0
CDY49218 Canola plasma membrane 0.2 0.35
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078C8B9InterPro:ACP_syn_III_CEnsemblPlants:CDX71278ProteinID:CDX71278ProteinID:CDX71278.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00144898001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF65MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EAB293SEG:seg
Description
BnaC07g05570D
Coordinates
chrLK031792:+:2292983..2295078
Molecular Weight (calculated)
57131.6 Da
IEP (calculated)
9.204
GRAVY (calculated)
-0.041
Length
507 amino acids
Sequence
(BLAST)
001: MEPVNGGSVQ IQNENGSRKL PNFLQSVNMK YVKLGYHYLI THLFKLCLVP LMAVLITEIS RLTPDDYHQI WLHLQYNLVA FILLSALAVF GTTVFIMTRP
101: RSVYLVDYSC YLPQASLQVP YKKFMDHSAL IDDFNESSLE FQRKILERSG LGEETYLPDG LHCVPPRTTM AAAREEAEQV MFGCLDKLFE NTKINPKDIG
201: VLVVNCSLFN PTPSLSAMIV NKYKLRGNVK SFNLGGMGCS AGVISIDLAK DMLQVHRNTY AVVVSTENIT QNWYFGNKKA MLIPNCLFRV GGTAVLLSNK
301: ASDRRRSKYK MVHTVRTHKG ADEKAFNCVY QEQDDNGKTG VSLSKDLMAI AGEALKANIT TLGPLVLPIS EQILFFVTLV WKKLFNAKLK PYIPDFKLAF
401: DHFCIHAGGR AVIDELEKNL QLSLTHVEAS RMTLHRFGNT SSSSIWYELA YIEAKGRMKK GNRVWQIAFG SGFKCNSAVW VALHNVKPSV SSPWEHCIDR
501: YPVKLDF
Best Arabidopsis Sequence Match ( AT2G16280.1 )
(BLAST)
001: MEAANEPVNG GSVQIRTENN ERRKLPNFLQ SVNMKYVKLG YHYLITHLFK LCLVPLMAVL VTEISRLTTD DLYQIWLHLQ YNLVAFIFLS ALAIFGSTVY
101: IMSRPRSVYL VDYSCYLPPE SLQVKYQKFM DHSKLIEDFN ESSLEFQRKI LERSGLGEET YLPEALHCIP PRPTMMAARE ESEQVMFGAL DKLFENTKIN
201: PRDIGVLVVN CSLFNPTPSL SAMIVNKYKL RGNVKSFNLG GMGCSAGVIS IDLAKDMLQV HRNTYAVVVS TENITQNWYF GNKKAMLIPN CLFRVGGSAI
301: LLSNKGKDRR RSKYKLVHTV RTHKGAVEKA FNCVYQEQDD NGKTGVSLSK DLMAIAGEAL KANITTLGPL VLPISEQILF FMTLVTKKLF NSKLKPYIPD
401: FKLAFDHFCI HAGGRAVIDE LEKNLQLSQT HVEASRMTLH RFGNTSSSSI WYELAYIEAK GRMKKGNRVW QIAFGSGFKC NSAVWVALNN VKPSVSSPWE
501: HCIDRYPVKL DF
Arabidopsis Description
KCS93-ketoacyl-CoA synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIX1]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.