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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68323 Canola endoplasmic reticulum, golgi 94.92 95.34
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 84.11 84.86
CDY37951 Canola endoplasmic reticulum, plasma membrane 83.66 84.41
CDY15199 Canola cytosol 40.4 53.82
CDY10355 Canola cytosol 29.8 52.33
CDX89699 Canola cytosol 35.98 50.15
CDY47458 Canola cytosol 5.52 50.0
CDX94721 Canola cytosol 43.27 49.49
CDY63070 Canola cytosol 39.07 48.1
CDY33931 Canola plastid 47.24 46.83
CDY05644 Canola plasma membrane, plastid, vacuole 46.14 45.73
CDY42109 Canola plasma membrane 48.79 44.47
CDY07381 Canola plasma membrane 48.79 44.47
CDY04232 Canola plasma membrane 48.79 44.47
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 46.58 44.23
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 45.03 43.97
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.59 43.53
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 36.87 42.93
CDY46243 Canola golgi 44.81 42.83
CDX76286 Canola golgi 44.59 42.62
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 40.18 42.23
CDY49290 Canola endoplasmic reticulum, golgi 38.85 41.61
CDY21665 Canola plasma membrane 46.58 41.37
CDX81929 Canola plasma membrane 46.36 41.18
CDY17465 Canola plasma membrane 43.05 41.05
CDX70186 Canola plastid 46.36 40.94
CDY29431 Canola plasma membrane 43.71 40.91
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 40.18 40.9
CDX72475 Canola endoplasmic reticulum, golgi 38.19 40.9
CDX71278 Canola cytosol, peroxisome, plasma membrane 45.7 40.83
CDY14892 Canola endoplasmic reticulum, golgi, plastid 47.24 40.68
CDX96912 Canola endoplasmic reticulum, golgi, plastid 47.24 40.61
CDX90012 Canola cytosol 47.24 40.45
CDY46211 Canola cytosol, peroxisome, plasma membrane 45.25 40.43
CDX98800 Canola plastid 46.14 40.35
CDX89834 Canola plasma membrane 46.36 40.31
CDY26665 Canola cytosol, peroxisome, plasma membrane 43.71 40.0
CDY37475 Canola plasma membrane 42.16 39.96
CDY18212 Canola plasma membrane 46.58 39.89
CDY32443 Canola plasma membrane 41.94 39.75
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 43.93 39.33
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 37.75 36.23
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 41.72 35.53
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 42.6 35.15
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 42.16 34.92
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 42.16 34.85
CDY41551 Canola golgi 42.83 30.84
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 42.83 30.46
TraesCS1A01G413000.1 Wheat golgi 7.06 14.48
TraesCS1B01G443100.1 Wheat cytosol 7.06 14.48
TraesCS1D01G420600.2 Wheat cytosol 7.06 14.48
EES19986 Sorghum cytosol 6.84 14.03
Os05t0574500-01 Rice nucleus 6.84 14.03
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078IIM5UniProt:A0A078IIM5InterPro:ACP_syn_III_CEnsemblPlants:CDY49219ProteinID:CDY49219ProteinID:CDY49219.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00092591001InterPro:IPR016039PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF20MetaCyc:PWY-4381MetaCyc:PWY-5080
MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602
MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-like
UniPathway:UPA00094UniParc:UPI0004EE235E::::
Description
BnaCnng17080D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A078IIM5]
Coordinates
chrLK032818:+:70309..71670
Molecular Weight (calculated)
50720.6 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.096
Length
453 amino acids
Sequence
(BLAST)
001: MGPSFPFIDQ VLLISQTLMS FPHLLVISAC LLVAVFAYHS FRPRCIYLID FSCYQPPDFL RSPIANFIEH LNLSGIFDRE CLDLQQKILE RSGIGDDACV
101: PVTVHEIPPH SSLSAAREET HDILFTVVQD LFSKHKIDPK SIDILVSNCS LFCPSPSITS IIINKFGMRS NVKSFSLSGM GCSAGLLSIN LVKDLMKIHS
201: GSLALVLSME AVSPNGYKGK CKSMLIANTI FRMGGAAILL SNRERDKDKA KYKLQHLIRT HLGSDDESYE SVMQEVDEEG LVGVALSKQL VKVASKALKI
301: NVVELGPRVL PYSEQLKYII SFIKRKWRNH KEKEVYTPNF KKAFEHFCIH AGGRAIIEGV EKHLKLEKED GEASRTTLYR YGNTSSSSLW YEMQYLEAKG
401: RMKKGDRVWQ IGLGSGFKAN SAVWKCVSEI DSRDKNAWSD RIHLYPVCGD ASG
Best Arabidopsis Sequence Match ( AT1G71160.1 )
(BLAST)
001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS
Arabidopsis Description
KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.