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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036405.1-P Field mustard cytosol, plasma membrane, plastid 96.23 99.57
AT2G15090.1 Thale cress golgi 89.94 89.19
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 75.05 77.16
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 74.21 76.29
CDY10355 Canola cytosol 40.46 74.81
CDY47458 Canola cytosol 7.76 74.0
CDX72475 Canola endoplasmic reticulum, golgi 63.94 72.1
CDY49290 Canola endoplasmic reticulum, golgi 63.73 71.87
CDX89699 Canola cytosol 46.96 68.92
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 56.39 62.41
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 57.65 61.8
CDY15199 Canola cytosol 44.03 61.76
KRH51526 Soybean plasma membrane 56.81 61.17
CDX94721 Canola cytosol 50.73 61.11
CDY46243 Canola golgi 58.91 59.28
CDY63070 Canola cytosol 45.7 59.24
CDY17465 Canola plasma membrane 58.91 59.16
CDX76286 Canola golgi 58.7 59.07
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 47.8 58.61
VIT_03s0063g02640.t01 Wine grape plasma membrane 61.01 57.74
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 61.22 57.71
CDY21665 Canola plasma membrane 61.64 57.65
CDX71278 Canola cytosol, peroxisome, plasma membrane 61.01 57.4
CDY46211 Canola cytosol, peroxisome, plasma membrane 60.8 57.2
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 50.52 57.11
CDX81929 Canola plasma membrane 61.01 57.06
Zm00001d009608_P001 Maize plasma membrane 60.17 56.83
Zm00001d039053_P001 Maize plasma membrane 61.22 56.81
Os05t0568000-02 Rice plasma membrane 61.01 56.61
CDY29431 Canola plasma membrane 57.23 56.41
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 54.51 56.28
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 61.22 56.15
CDY26665 Canola cytosol, peroxisome, plasma membrane 58.07 55.96
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 60.59 55.05
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 54.3 54.99
TraesCS1A01G406200.1 Wheat plasma membrane 60.17 54.98
TraesCS1D01G414600.1 Wheat peroxisome 60.38 54.86
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 47.38 53.94
CDX70186 Canola plastid 56.39 52.44
CDX89834 Canola plasma membrane 56.81 52.02
CDX98800 Canola plastid 56.39 51.93
CDY14892 Canola endoplasmic reticulum, golgi, plastid 56.81 51.52
CDY07381 Canola plasma membrane 53.67 51.51
CDY42109 Canola plasma membrane 53.46 51.31
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 50.73 51.27
CDX96912 Canola endoplasmic reticulum, golgi, plastid 56.6 51.23
CDY04232 Canola plasma membrane 53.25 51.11
CDY18212 Canola plasma membrane 56.6 51.04
HORVU1Hr1G089710.3 Barley plastid 60.59 49.07
CDX90012 Canola cytosol 53.25 48.02
CDY37475 Canola plasma membrane 48.01 47.91
CDY32443 Canola plasma membrane 47.8 47.7
CDY49219 Canola endoplasmic reticulum, plasma membrane 44.23 46.58
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 42.98 45.66
CDY37951 Canola endoplasmic reticulum, plasma membrane 42.98 45.66
CDX68323 Canola endoplasmic reticulum, golgi 42.98 45.45
CDY05644 Canola plasma membrane, plastid, vacuole 41.51 43.33
CDY33931 Canola plastid 41.09 42.89
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 46.75 41.92
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 47.8 41.61
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 47.38 41.32
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 47.38 41.17
CDY41551 Canola golgi 49.9 37.84
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 50.52 37.83
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078C2Z7InterPro:ACP_syn_III_CEnsemblPlants:CDX71202ProteinID:CDX71202ProteinID:CDX71202.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00144750001InterPro:IPR016039
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF23MetaCyc:PWY-4381
MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601
MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725SUPFAM:SSF53901SignalP:SignalP-TM
InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EDC14ASEG:seg::
Description
BnaC07g04810D3-ketoacyl-CoA synthase 8 [Source:Projected from Arabidopsis thaliana (AT2G15090) UniProtKB/Swiss-Prot;Acc:Q4V3C9]
Coordinates
chrLK031792:+:942283..943716
Molecular Weight (calculated)
53810.9 Da
IEP (calculated)
9.268
GRAVY (calculated)
-0.058
Length
477 amino acids
Sequence
(BLAST)
001: MKNLKMFFFK ILFISLMVAL SMKGSGINLE DLQNVFHHNL ETITLLSFPL LFLLTIYMLS RPKPVYLVDF SCYLPPSHLK VSVKTLMEHA RRAREAGVCW
101: KNKENDYLIE FQQKILERSG LGQETCIPEG LQCFPLQQDM AASRKETAEV IFGALDNLFR NTGVKPGEIG ILVVNSSTFN PTPSLASMIV NKYKLRDNIK
201: SLNLGGMGCS AGVIAIDVAK GLLQVHRNTY AIVVSTENIT QNLYLGKNKS MLVTNCLFRV GGAAILLSNR SRDRARAKYE LLHTVRIHTG SDDRSFECAT
301: QEEDEDGIIG VTLTKNLPMV AARTLKINIA TLGPLVLPMK EKLAFFVTFL KKKYFRPELK NYTPDFKLAF EHFCIHAGGR ALIDELEKNL KLSPLHVEAS
401: RMTLHRFGNT SSSSIWYELA YTEAKGRMKE GDRIWQIALG SGFKCNSSVW VALRNVKPSV HNPWEDCMDR YPVEIDI
Best Arabidopsis Sequence Match ( AT2G15090.1 )
(BLAST)
001: MKNLKMVFFK ILFISLMAGL AMKGSKINVE DLQKFSLHHT QNNLQTISLL LFLVVFVWIL YMLTRPKPVY LVDFSCYLPP SHLKVSIQTL MGHARRAREA
101: GMCWKNKESD HLVDFQEKIL ERSGLGQETY IPEGLQCFPL QQGMGASRKE TEEVIFGALD NLFRNTGVKP DDIGILVVNS STFNPTPSLA SMIVNKYKLR
201: DNIKSLNLGG MGCSAGVIAV DVAKGLLQVH RNTYAIVVST ENITQNLYLG KNKSMLVTNC LFRVGGAAVL LSNRSRDRNR AKYELVHTVR IHTGSDDRSF
301: ECATQEEDED GIIGVTLTKN LPMVAARTLK INIATLGPLV LPLKEKLAFF ITFVKKKYFK PELRNYTPDF KLAFEHFCIH AGGRALIDEL EKNLKLSPLH
401: VEASRMTLHR FGNTSSSSIW YELAYTEAKG RMKEGDRIWQ IALGSGFKCN SSVWVALRDV KPSANSPWED CMDRYPVEID I
Arabidopsis Description
KCS83-ketoacyl-CoA synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C9]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.