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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49219 Canola endoplasmic reticulum, plasma membrane 95.34 94.92
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 84.48 84.86
CDY37951 Canola endoplasmic reticulum, plasma membrane 83.81 84.19
VIT_12s0034g01840.t01 Wine grape endoplasmic reticulum, golgi 62.08 61.0
KRH10421 Soybean endoplasmic reticulum, plasma membrane 61.2 60.13
Bra003934.1-P Field mustard plasma membrane 97.56 58.9
CDY15199 Canola cytosol 41.02 54.41
CDY47458 Canola cytosol 5.76 52.0
CDY10355 Canola cytosol 29.49 51.55
CDX89699 Canola cytosol 35.92 49.85
CDX94721 Canola cytosol 43.24 49.24
CDY63070 Canola cytosol 39.25 48.1
CDY33931 Canola plastid 47.01 46.39
CDY05644 Canola plasma membrane, plastid, vacuole 46.12 45.51
CDY04232 Canola plasma membrane 49.0 44.47
CDY07381 Canola plasma membrane 48.78 44.27
CDY42109 Canola plasma membrane 48.78 44.27
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 45.45 42.98
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 44.12 42.89
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.9 42.67
CDY46243 Canola golgi 44.35 42.19
CDX76286 Canola golgi 44.12 41.98
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 35.92 41.65
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 39.47 41.3
CDY49290 Canola endoplasmic reticulum, golgi 38.36 40.9
CDX90012 Canola cytosol 47.67 40.64
CDY21665 Canola plasma membrane 45.9 40.59
CDX72475 Canola endoplasmic reticulum, golgi 37.92 40.43
CDX81929 Canola plasma membrane 45.68 40.39
CDX70186 Canola plastid 45.9 40.35
CDY29431 Canola plasma membrane 43.24 40.29
CDX71278 Canola cytosol, peroxisome, plasma membrane 45.23 40.24
CDY17465 Canola plasma membrane 42.35 40.21
CDY37475 Canola plasma membrane 42.57 40.17
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 39.47 40.0
CDY32443 Canola plasma membrane 42.35 39.96
CDY14892 Canola endoplasmic reticulum, golgi, plastid 46.56 39.92
CDX96912 Canola endoplasmic reticulum, golgi, plastid 46.56 39.85
CDY46211 Canola cytosol, peroxisome, plasma membrane 44.79 39.84
CDX98800 Canola plastid 45.68 39.77
CDX89834 Canola plasma membrane 45.9 39.73
CDY18212 Canola plasma membrane 46.34 39.51
CDY26665 Canola cytosol, peroxisome, plasma membrane 43.24 39.39
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 43.46 38.74
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 37.47 35.81
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 41.46 35.15
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 42.35 34.79
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 41.91 34.55
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 41.91 34.49
CDY41551 Canola golgi 43.24 31.0
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 43.24 30.61
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078BZI3InterPro:ACP_syn_III_CEnsemblPlants:CDX68323ProteinID:CDX68323ProteinID:CDX68323.1InterPro:FAE1_typ3_polyketide_synth
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00099620001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PFscan:PS51257
PANTHER:PTHR31561PANTHER:PTHR31561:SF20MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433
MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724
MetaCyc:PWY-7725SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EE4939
Description
BnaA07g23630D
Coordinates
chrLK031787:+:5014014..5015369
Molecular Weight (calculated)
50370.2 Da
IEP (calculated)
8.697
GRAVY (calculated)
-0.068
Length
451 amino acids
Sequence
(BLAST)
001: MGLSFRFIDQ VLLISQTLLS FPHLLVISAC LLIAVFSYHS FKPTHIYLID FSCYQPPDFL RSPIANFIEH LNLSGIFDRE CLDLQQKILE RSGIGDDACV
101: PVTVHEIPPH SSLSAAREET HDILFTVVQD LFSKHKIDPK SIDILVSNCS LFCPSPSITS IIINRFGMRS NVKSFSLSGM GCSAGLLSIN LVKDLMKIHG
201: GSLALVLSME AVSPNGYKGK CKSMLIANTI FRMGGAAILL SNRDQDKDKA KYKLQHLIRT HLGSDDESYE SVMQEVDEEG LVGVALSKQL VKVASKALKI
301: NVVELGPRVL PYSEQLKYII SFIKRKWGKQ NEMYTPNFKK AFEHFCIHAG GRAIIEGVEK HLKLGKEDGE ASRTTLYRYG NTSSSSLWYE MQYLEAKGRM
401: KKGDRVWQIG FGSGFKANSA VWKCITKIDS RDKNAWSDRI HLYPVCGDAS G
Best Arabidopsis Sequence Match ( AT1G71160.1 )
(BLAST)
001: MESSFHFINE ALLITQTFIT FHQFLVASAC VLIAVFGYYF FKPRCIIYLI DFSCYQPPDF LRAPVSNFIE HLTISGVFDQ ESLDLQQKIL ERSGISDDAS
101: VPATVHEIPP NASISAAREE THEILFAIVQ DLFSKHEIDP KSIDILVSNC SLFCPSPSIT SMIINKFGMR SDIKSFSLSG MGCSAGILSV NLVKDLMKIH
201: GDSLALVLSM EAVSPNGYRG KCKSMLIANT IFRMGGAAIL LSNRKQDSHK AKYKLQHIIR THVGSDTESY ESVMQQVDEE GKVGVALSKQ LVRVASKALK
301: INVVQLGPRV LPYSEQLKYI ISFIQRKWGM HKEIYTPNFK KAFEHFCIHA GGRAIIEGVE KHLKLDKEDV EASRSTLYRY GNTSSSSLWY ELQYLEAKGR
401: MKMGDKVWQI GFGSGFKANS AVWKCISEID SRGRNAWSDR IHLYPVCGDT SSALKTELLS
Arabidopsis Description
KCS73-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W4M1]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.