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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034635.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 99.41 99.41
CDY17465 Canola plasma membrane 92.49 98.53
AT4G34520.1 Thale cress golgi 85.77 85.77
CDY10355 Canola cytosol 42.09 82.56
CDY47458 Canola cytosol 8.1 82.0
CDX89699 Canola cytosol 46.64 72.62
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 61.26 71.93
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 62.65 71.24
KRH51526 Soybean plasma membrane 56.92 65.01
CDX71278 Canola cytosol, peroxisome, plasma membrane 63.64 63.51
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 57.91 63.15
CDY46211 Canola cytosol, peroxisome, plasma membrane 63.24 63.12
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 48.42 62.98
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.71 62.93
VIT_03s0063g02640.t01 Wine grape plasma membrane 62.06 62.3
CDX72475 Canola endoplasmic reticulum, golgi 51.38 61.47
CDX76286 Canola golgi 57.51 61.39
CDY46243 Canola golgi 57.51 61.39
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 57.71 61.22
CDY29431 Canola plasma membrane 58.1 60.74
CDY49290 Canola endoplasmic reticulum, golgi 50.4 60.28
CDY21665 Canola plasma membrane 60.47 60.0
CDX94721 Canola cytosol 46.84 59.85
CDY26665 Canola cytosol, peroxisome, plasma membrane 58.5 59.8
CDY15199 Canola cytosol 40.12 59.71
CDX81929 Canola plasma membrane 59.88 59.41
Zm00001d009608_P001 Maize plasma membrane 59.09 59.21
GSMUA_Achr6P27270_001 Banana cytosol, peroxisome, plasma membrane 48.81 58.53
GSMUA_Achr5P09090_001 Banana golgi, peroxisome, plasma membrane 48.42 58.47
GSMUA_Achr2P08980_001 Banana golgi, peroxisome, plasma membrane 52.77 57.79
CDY63070 Canola cytosol 41.9 57.61
Zm00001d039053_P001 Maize plasma membrane 58.5 57.59
Os05t0568000-02 Rice plasma membrane 58.3 57.39
EES19964 Sorghum endoplasmic reticulum, plasma membrane, plastid 58.5 56.92
TraesCS1A01G406200.1 Wheat plasma membrane 58.1 56.32
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 58.3 56.19
TraesCS1D01G414600.1 Wheat peroxisome 58.3 56.19
GSMUA_Achr9P06980_001 Banana cytosol, golgi, peroxisome 51.98 55.84
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.78 55.51
CDX70186 Canola plastid 54.55 53.8
CDX98800 Canola plastid 54.55 53.28
CDY07381 Canola plasma membrane 50.79 51.71
CDY04232 Canola plasma membrane 50.4 51.31
CDX89834 Canola plasma membrane 52.57 51.06
CDY42109 Canola plasma membrane 49.6 50.5
CDX96912 Canola endoplasmic reticulum, golgi, plastid 52.57 50.47
CDY14892 Canola endoplasmic reticulum, golgi, plastid 52.37 50.38
CDY18212 Canola plasma membrane 52.37 50.09
HORVU1Hr1G089710.3 Barley plastid 58.3 50.08
CDY37475 Canola plasma membrane 44.86 47.49
CDX90012 Canola cytosol 49.6 47.45
CDY32443 Canola plasma membrane 44.66 47.28
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 39.53 44.54
CDY37951 Canola endoplasmic reticulum, plasma membrane 39.33 44.32
CDY49219 Canola endoplasmic reticulum, plasma membrane 39.33 43.93
CDX68323 Canola endoplasmic reticulum, golgi 38.74 43.46
CDY33931 Canola plastid 38.34 42.45
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 44.27 42.11
CDY05644 Canola plasma membrane, plastid, vacuole 37.94 42.01
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 45.26 41.79
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 45.06 41.68
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 45.06 41.53
CDY41551 Canola golgi 46.64 37.52
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 47.23 37.52
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
ProteinID:AAX58619.1InterPro:ACP_syn_III_CProteinID:ADB85630.1unigene:Bna.2225EnsemblPlants:CDX76287ProteinID:CDX76287
ProteinID:CDX76287.1InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629
GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00126652001InterPro:IPR016039
PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF23MetaCyc:PWY-4381
MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598MetaCyc:PWY-7036MetaCyc:PWY-7601
MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725GO:Q56NH6UniProt:Q56NH6
SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI00004F8B68:
Description
BnaA08g11130D3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:Q56NH6]
Coordinates
chrLK031807:+:151548..153068
Molecular Weight (calculated)
56459.2 Da
IEP (calculated)
9.524
GRAVY (calculated)
-0.100
Length
506 amino acids
Sequence
(BLAST)
001: MTSVNVKLLY HYVITNLFNL CFFPLTAIVA GKAYRLTIDD LHHLYYSYLQ HNLITIAPLF AFTVFGSVLY IATRPKPVYL VEYSCYLPPT HCRSSISKVM
101: DIFYQVRKAD PSRNGTCDDS SWLDFLRKIQ ERSGLGDETH GPEGLLQVPP RKTFAAAREE TEQVIIGALE NLFKNTNVNP KDIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNVRSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITYNIYAG DNRSMMVSNC LFRVGGAAIL LFNKPGDRRR SKYELVHTVR
301: THTGADDKSF RCVQQGDDEN GKIGVSLSKD ITDVAGRTVK KNIATLGPLI LPLSEKLLFF VTFMGKKLFK DKIKHYYVPD FKLAIDHFCI HAGGRAVIDV
401: LEKNLALAPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKVW QIALGSGFKC NSAVWVALNN VKASTNSPWE HCIDRYPVKI DSDSGKSETR
501: VQNGRS
Best Arabidopsis Sequence Match ( AT4G34520.1 )
(BLAST)
001: MTSVNVKLLY RYVLTNFFNL CLFPLTAFLA GKASRLTIND LHNFLSYLQH NLITVTLLFA FTVFGLVLYI VTRPNPVYLV DYSCYLPPPH LKVSVSKVMD
101: IFYQIRKADT SSRNVACDDP SSLDFLRKIQ ERSGLGDETY SPEGLIHVPP RKTFAASREE TEKVIIGALE NLFENTKVNP REIGILVVNS SMFNPTPSLS
201: AMVVNTFKLR SNIKSFNLGG MGCSAGVIAI DLAKDLLHVH KNTYALVVST ENITQGIYAG ENRSMMVSNC LFRVGGAAIL LSNKSGDRRR SKYKLVHTVR
301: THTGADDKSF RCVQQEDDES GKIGVCLSKD ITNVAGTTLT KNIATLGPLI LPLSEKFLFF ATFVAKKLLK DKIKHYYVPD FKLAVDHFCI HAGGRAVIDE
401: LEKNLGLSPI DVEASRSTLH RFGNTSSSSI WYELAYIEAK GRMKKGNKAW QIALGSGFKC NSAVWVALRN VKASANSPWQ HCIDRYPVKI DSDLSKSKTH
501: VQNGRS
Arabidopsis Description
FAE13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.