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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94721 Canola cytosol 86.14 80.05
CDY15199 Canola cytosol 59.78 64.71
CDX89834 Canola plasma membrane 91.03 64.3
CDY18212 Canola plasma membrane 91.3 63.52
CDY10355 Canola cytosol 44.02 62.79
AT1G04220.1 Thale cress plasma membrane 88.86 61.93
PGSC0003DMT400042065 Potato cytosol 62.23 61.56
CDX89699 Canola cytosol 54.08 61.23
CDY14892 Canola endoplasmic reticulum, golgi, plastid 85.33 59.7
CDX96912 Canola endoplasmic reticulum, golgi, plastid 85.05 59.39
Os11t0591200-01 Rice mitochondrion 69.57 59.26
CDY47458 Canola cytosol 7.34 54.0
PGSC0003DMT400041959 Potato endoplasmic reticulum, golgi, vacuole 62.5 52.39
TraesCS6A01G073300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 72.01 52.17
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 72.28 51.85
TraesCS4D01G148300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 71.74 51.56
CDX70186 Canola plastid 71.47 51.27
Zm00001d048953_P001 Maize mitochondrion, plastid 71.2 51.07
TraesCS4A01G164400.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 70.65 50.78
CDX98800 Canola plastid 71.47 50.77
KXG28804 Sorghum plastid 71.2 50.19
GSMUA_Achr3P15310_001 Banana cytosol, nucleus, plastid 66.3 50.0
PGSC0003DMT400041960 Potato endoplasmic reticulum, golgi, vacuole 60.6 49.78
CDX76286 Canola golgi 63.59 49.37
CDY46243 Canola golgi 63.32 49.16
CDY47457 Canola cytosol, endoplasmic reticulum, plasma membrane 51.9 49.1
KRH04744 Soybean endoplasmic reticulum, plasma membrane, vacuole 62.23 49.04
TraesCS6D01G071600.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 72.28 48.81
Solyc06g053870.2.1 Tomato mitochondrion 64.13 48.56
PGSC0003DMT400014188 Potato endoplasmic reticulum, golgi, plasma membrane 64.67 48.28
CDX89700 Canola endoplasmic reticulum, golgi, plasma membrane 56.25 48.03
KRH57768 Soybean plasma membrane 61.14 47.97
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 63.86 47.67
PGSC0003DMT400042071 Potato plasma membrane 63.04 47.54
CDX69040 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 58.97 46.77
CDX75415 Canola cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 58.7 46.55
CDY02266 Canola endoplasmic reticulum, golgi, plasma membrane 56.25 46.52
CDY21665 Canola plasma membrane 64.13 46.27
CDX81929 Canola plasma membrane 64.13 46.27
CDX71278 Canola cytosol, peroxisome, plasma membrane 63.59 46.15
CDY29431 Canola plasma membrane 60.6 46.07
CDY46211 Canola cytosol, peroxisome, plasma membrane 63.32 45.96
EES08876 Sorghum cytosol, endoplasmic reticulum, plasma membrane 66.3 45.86
CDY37475 Canola plasma membrane 59.51 45.82
CDX71202 Canola endoplasmic reticulum, golgi, plasma membrane 59.24 45.7
CDY32443 Canola plasma membrane 59.24 45.61
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 61.14 45.45
CDY26665 Canola cytosol, peroxisome, plasma membrane 60.87 45.25
CDY07381 Canola plasma membrane 60.87 45.07
CDY04232 Canola plasma membrane 60.6 44.87
CDX90012 Canola cytosol 64.4 44.8
CDY42109 Canola plasma membrane 59.78 44.27
CDY49290 Canola endoplasmic reticulum, golgi 50.0 43.5
CDY17465 Canola plasma membrane 55.98 43.37
CDX72475 Canola endoplasmic reticulum, golgi 49.46 43.03
CDX76287 Canola endoplasmic reticulum, golgi, plasma membrane 57.61 41.9
CDY05644 Canola plasma membrane, plastid, vacuole 50.54 40.7
CDY33931 Canola plastid 50.0 40.26
CDY26762 Canola endoplasmic reticulum, peroxisome, plasma membrane 51.63 40.25
CDY37951 Canola endoplasmic reticulum, plasma membrane 48.64 39.87
CDX68323 Canola endoplasmic reticulum, golgi 48.1 39.25
CDY66107 Canola endoplasmic reticulum, plasma membrane, plastid 47.83 39.2
CDY49219 Canola endoplasmic reticulum, plasma membrane 48.1 39.07
CDX77038 Canola cytosol, endoplasmic reticulum, plasma membrane 55.71 38.53
CDY11498 Canola endoplasmic reticulum, peroxisome, plasma membrane 57.07 38.32
CDX76724 Canola cytosol, endoplasmic reticulum, plasma membrane 56.25 37.84
CDY35309 Canola cytosol, endoplasmic reticulum, plasma membrane 55.98 37.52
CDY41551 Canola golgi 60.05 35.14
CDX80041 Canola endoplasmic reticulum, golgi, plasma membrane 60.05 34.69
CDY49218 Canola plasma membrane 0.0 0.0
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199KEGG:00650+2.3.1.19InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1
GO:A0A078JED0UniProt:A0A078JED0InterPro:ACP_syn_III_CEnsemblPlants:CDY63070ProteinID:CDY63070ProteinID:CDY63070.1
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016747EnsemblPlantsGene:GSBRNA2T00037895001InterPro:IPR016039PFAM:PF08392PFAM:PF08541PANTHER:PTHR31561
PANTHER:PTHR31561:SF25MetaCyc:PWY-4381MetaCyc:PWY-5080MetaCyc:PWY-5972MetaCyc:PWY-6433MetaCyc:PWY-6598
MetaCyc:PWY-7036MetaCyc:PWY-7601MetaCyc:PWY-7602MetaCyc:PWY-7619MetaCyc:PWY-7724MetaCyc:PWY-7725
SUPFAM:SSF53901InterPro:Thiolase-likeUniPathway:UPA00094UniParc:UPI0004EE879ASEG:seg:
Description
BnaCnng41340DBnaCnng41340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JED0]
Coordinates
chrLK034240:-:8718..11130
Molecular Weight (calculated)
40948.1 Da
IEP (calculated)
9.456
GRAVY (calculated)
-0.307
Length
368 amino acids
Sequence
(BLAST)
001: MDRSQRVGIF SKDNLAFQQN ILERSGLGQK TYVPEALLRV PPNPSMSEAR KEAETVMFGA IDAVLEKTGV KPKEIGILVV NCSLFNPTPS LSAMIVNKYK
101: LRENILTYNL GGMGCSAGLI SIDLVKQLLQ VQANSYALVV STENITLNWY TGNDRSMLLS NCIFRMGGAA VLFSNRSSDR RLSKYQLLHT VRTHKGADDN
201: AFNSAYHCED KNNNNKIGVS LSKDLMKIAG EALKTNIATL GPLLLPLAFE HFCIHAGGRA VLDEIQKNLD LSEWQMEPSR MTLNRFGNTS SSSVWYELSY
301: SEAKGRIKRG DKTWQIGFGS GFKCNSAVWR ALRSIDPSKE KKTNPWIDEI HEFPVQVPRI SSSSSESR
Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.