Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 93.39 | 91.52 |
| Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 93.62 | 83.03 |
| PGSC0003DMT400042065 | Potato | cytosol | 59.45 | 70.16 |
| CDX94721 | Canola | cytosol | 59.45 | 65.91 |
| CDY63070 | Canola | cytosol | 52.39 | 62.5 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 65.83 | 59.22 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 65.6 | 58.42 |
| Os11t0591200-01 | Rice | mitochondrion | 56.95 | 57.87 |
| PGSC0003DMT400034973 | Potato | plasma membrane | 64.92 | 54.91 |
| PGSC0003DMT400015633 | Potato | plasma membrane | 63.55 | 53.55 |
| CDX89834 | Canola | plasma membrane | 63.33 | 53.36 |
| PGSC0003DMT400019029 | Potato | plasma membrane | 61.28 | 53.27 |
| PGSC0003DMT400002734 | Potato | cytosol, peroxisome, plasma membrane | 61.05 | 52.45 |
| CDY18212 | Canola | plasma membrane | 63.1 | 52.36 |
| Bra015296.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 63.1 | 52.36 |
| Bra033694.1-P | Field mustard | golgi, peroxisome, plastid | 62.64 | 52.28 |
| PGSC0003DMT400067205 | Potato | peroxisome | 61.05 | 52.24 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 62.64 | 51.98 |
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 60.14 | 51.97 |
| CDY14892 | Canola | endoplasmic reticulum, golgi, plastid | 62.19 | 51.9 |
| AT1G04220.1 | Thale cress | plasma membrane | 62.41 | 51.89 |
| PGSC0003DMT400037757 | Potato | plastid | 54.44 | 51.84 |
| Bra035992.1-P | Field mustard | plasma membrane | 61.96 | 51.71 |
| CDX96912 | Canola | endoplasmic reticulum, golgi, plastid | 61.96 | 51.61 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 59.91 | 51.27 |
| TraesCS4D01G148300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 59.45 | 50.98 |
| KRH04744 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 54.21 | 50.96 |
| TraesCS4A01G164400.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 58.77 | 50.39 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 58.31 | 49.9 |
| KRH57768 | Soybean | plasma membrane | 53.3 | 49.89 |
| KXG28804 | Sorghum | plastid | 58.31 | 49.04 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 55.13 | 48.79 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 60.14 | 48.44 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 54.67 | 48.39 |
| GSMUA_Achr3P15310_001 | Banana | cytosol, nucleus, plastid | 52.62 | 47.34 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 52.85 | 46.96 |
| PGSC0003DMT400028047 | Potato | plasma membrane | 56.49 | 46.36 |
| PGSC0003DMT400009451 | Potato | cytosol, peroxisome, plasma membrane | 54.67 | 46.24 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 55.35 | 45.68 |
| PGSC0003DMT400049683 | Potato | endoplasmic reticulum, golgi | 43.74 | 43.15 |
| PGSC0003DMT400051894 | Potato | endoplasmic reticulum, plasma membrane | 41.46 | 40.27 |
| PGSC0003DMT400019063 | Potato | cytosol, peroxisome, plasma membrane | 48.97 | 39.81 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | InterPro:IPR016039 | UniProt:M1BC95 | PFAM:PF08392 |
| PFAM:PF08541 | EnsemblPlantsGene:PGSC0003DMG400016275 | PGSC:PGSC0003DMG400016275 | EnsemblPlants:PGSC0003DMT400041959 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF25 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI0002964263 | SEG:seg |
Description
Acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400016275]
Coordinates
chr6:-:40080104..40081865
Molecular Weight (calculated)
49639.7 Da
IEP (calculated)
8.973
GRAVY (calculated)
-0.047
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKSWPIIII IIIFFAALYL IRGRPRNVYL VDFACYKPDE ADMMSKQQLL DIMSLTFDDE AVHLQKKVLE KSGYSDKTYI PEGIRRLPEK LLTFEESRKE
101: TEKVMFGAID DLLAKTKVKA REIGIIIVNI GLYNPTPSLS SMIVNHYKLG SDVLTYNISG MGCSAGLISI DLANRLLQTQ VSAYAMVVST ESIHCGYYLG
201: KDKSKLVSNC LFRMGAAAIL LSNCFSDSRR SKYKLMHVVR THKGADDRAF KSIYQEQDED GNIGISLSKG LMVVAGETLK SNITTLGPLV LPMSEQLLYF
301: GYLIARKIFK LKNIKPYIPD FKLAFEHFFI HAGGRAVLDE MEKNLDLTEW HMEPSRMTLY RFGNTSSSSV WYELAYSEAK GRIKKGDRAW QIGFGSGFKC
401: NSVVWHALKT INPAMEKNPW TDEIHDFPVN VPLVMPLSV
101: TEKVMFGAID DLLAKTKVKA REIGIIIVNI GLYNPTPSLS SMIVNHYKLG SDVLTYNISG MGCSAGLISI DLANRLLQTQ VSAYAMVVST ESIHCGYYLG
201: KDKSKLVSNC LFRMGAAAIL LSNCFSDSRR SKYKLMHVVR THKGADDRAF KSIYQEQDED GNIGISLSKG LMVVAGETLK SNITTLGPLV LPMSEQLLYF
301: GYLIARKIFK LKNIKPYIPD FKLAFEHFFI HAGGRAVLDE MEKNLDLTEW HMEPSRMTLY RFGNTSSSSV WYELAYSEAK GRIKKGDRAW QIGFGSGFKC
401: NSVVWHALKT INPAMEKNPW TDEIHDFPVN VPLVMPLSV
001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ
Arabidopsis Description
KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.