Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G073300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 95.91 | 96.85 |
| TraesCS6D01G071600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 98.83 | 93.03 |
| Os11t0591200-01 | Rice | mitochondrion | 70.57 | 83.8 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 79.34 | 79.34 |
| KXG28804 | Sorghum | plastid | 80.51 | 79.12 |
| CDX94721 | Canola | cytosol | 58.67 | 76.01 |
| CDY63070 | Canola | cytosol | 51.85 | 72.28 |
| KRH34362 | Soybean | plasma membrane | 69.4 | 68.86 |
| VIT_05s0020g04540.t01 | Wine grape | plasma membrane | 69.79 | 68.71 |
| KRG92437 | Soybean | plasma membrane | 68.81 | 68.28 |
| KRH69063 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 69.01 | 67.95 |
| Solyc03g005320.2.1 | Tomato | plasma membrane | 68.42 | 67.63 |
| PGSC0003DMT400034973 | Potato | plasma membrane | 68.42 | 67.63 |
| KRH31633 | Soybean | endoplasmic reticulum, nucleus, plastid | 68.03 | 67.5 |
| CDX89834 | Canola | plasma membrane | 68.42 | 67.37 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 68.23 | 67.18 |
| Solyc09g083050.2.1 | Tomato | plasma membrane | 67.06 | 67.06 |
| PGSC0003DMT400015633 | Potato | plasma membrane | 67.25 | 66.22 |
| Bra015296.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 68.23 | 66.16 |
| CDY18212 | Canola | plasma membrane | 68.03 | 65.97 |
| PGSC0003DMT400042065 | Potato | cytosol | 47.56 | 65.59 |
| Bra033694.1-P | Field mustard | golgi, peroxisome, plastid | 66.86 | 65.21 |
| AT1G04220.1 | Thale cress | plasma membrane | 67.06 | 65.15 |
| AT5G43760.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 66.86 | 64.84 |
| CDY14892 | Canola | endoplasmic reticulum, golgi, plastid | 66.47 | 64.83 |
| Bra035992.1-P | Field mustard | plasma membrane | 66.28 | 64.64 |
| CDX96912 | Canola | endoplasmic reticulum, golgi, plastid | 66.28 | 64.52 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 65.89 | 64.5 |
| EES08876 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 66.86 | 64.47 |
| GSMUA_Achr3P15310_001 | Banana | cytosol, nucleus, plastid | 58.48 | 61.48 |
| PGSC0003DMT400041959 | Potato | endoplasmic reticulum, golgi, vacuole | 51.27 | 59.91 |
| PGSC0003DMT400014188 | Potato | endoplasmic reticulum, golgi, plasma membrane | 56.14 | 58.42 |
| Solyc06g053870.2.1 | Tomato | mitochondrion | 55.17 | 58.23 |
| Solyc05g013220.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 55.95 | 58.22 |
| PGSC0003DMT400042071 | Potato | plasma membrane | 54.97 | 57.79 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 59.06 | 57.71 |
| PGSC0003DMT400041960 | Potato | endoplasmic reticulum, golgi, vacuole | 49.71 | 56.92 |
| Solyc06g053900.2.1 | Tomato | cytosol, plasma membrane, plastid | 54.0 | 55.96 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 54.0 | 54.96 |
| KRH04744 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 49.71 | 54.6 |
| TraesCS4B01G278800.1 | Wheat | golgi | 53.8 | 54.12 |
| KRH57768 | Soybean | plasma membrane | 48.93 | 53.52 |
| TraesCS1B01G421100.1 | Wheat | golgi | 48.15 | 53.23 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 51.66 | 52.89 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 49.51 | 52.48 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 54.58 | 51.28 |
| TraesCS7B01G449000.1 | Wheat | golgi | 47.37 | 49.9 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 46.2 | 49.58 |
| TraesCS7B01G113000.1 | Wheat | golgi | 46.78 | 48.88 |
| TraesCS4B01G274700.1 | Wheat | plastid | 44.83 | 48.02 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 42.11 | 48.0 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 44.64 | 46.73 |
| TraesCS6B01G372900.1 | Wheat | golgi | 45.42 | 46.32 |
| TraesCS4B01G297500.1 | Wheat | golgi | 48.73 | 46.3 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 37.43 | 46.04 |
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 43.08 | 45.29 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 42.88 | 45.08 |
| TraesCS7B01G113200.1 | Wheat | golgi | 43.66 | 45.07 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 43.66 | 45.07 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 42.3 | 44.56 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 41.33 | 43.71 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 38.99 | 43.67 |
| TraesCS7B01G006300.1 | Wheat | golgi | 40.74 | 42.92 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 41.13 | 41.7 |
| TraesCS1B01G443100.1 | Wheat | cytosol | 7.6 | 17.65 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF62 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS6B01G098300 | EnsemblPlants:TraesCS6B01G098300.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:75915293..75918621
Molecular Weight (calculated)
56156.1 Da
IEP (calculated)
9.921
GRAVY (calculated)
-0.030
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAAQETTA GGGGDGKRQG PCRPGHLKLG YHIVVSNAVY VLLAPFAAAL ALRASRLTPS DLAAARAYLL ANLHLAVSLV SVATALATVY LARRPRAVYL
101: LDFACYKPGP DHVVTRETFM KQSSKAGVFT DDNLAFQRKI LERSGLGQGT YFPAAVLNSP PNPCMAEARR EAEAVMFGAI DSLLAKTGVR ARDIGVVVVN
201: CSLFNPTPSL SAMVVNHYKL RGNVASYNLG GMGCSAGLIS IDLAKQLLQV HRNSYALVVS MENITLNWYW GNDRSMLMSN CLFRMGGAAI LLSNRAADKR
301: RSKYQLVHTV RTHHGADDRA YRCVFQEEDK AGRVGVALSK DLMAVAGEAL KTNITTLGPL VLPMSEQILF LTSLIGKKIF GLKMKPYIPD FKMAFEHFCI
401: HAGGRAVLDT IEKNLELSDW HMEPSRMTLN RWGNTSSSSL WYELAYTEAK GRVRRGHRAW QIAFGSGFKC NSAVWRALKD IHPSKEAGSN PWIEEIHRFP
501: VEVPKVESVV SSP
101: LDFACYKPGP DHVVTRETFM KQSSKAGVFT DDNLAFQRKI LERSGLGQGT YFPAAVLNSP PNPCMAEARR EAEAVMFGAI DSLLAKTGVR ARDIGVVVVN
201: CSLFNPTPSL SAMVVNHYKL RGNVASYNLG GMGCSAGLIS IDLAKQLLQV HRNSYALVVS MENITLNWYW GNDRSMLMSN CLFRMGGAAI LLSNRAADKR
301: RSKYQLVHTV RTHHGADDRA YRCVFQEEDK AGRVGVALSK DLMAVAGEAL KTNITTLGPL VLPMSEQILF LTSLIGKKIF GLKMKPYIPD FKMAFEHFCI
401: HAGGRAVLDT IEKNLELSDW HMEPSRMTLN RWGNTSSSSL WYELAYTEAK GRVRRGHRAW QIAFGSGFKC NSAVWRALKD IHPSKEAGSN PWIEEIHRFP
501: VEVPKVESVV SSP
001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR
Arabidopsis Description
KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.