Factsheet for TraesCS6B01G473900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G415500.2	Wheat	mitochondrion	96.63	96.44
Os10t0416200-01	Rice	cytosol, mitochondrion	84.13	81.07
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	73.61	74.95
TraesCS4B01G278800.1	Wheat	golgi	74.8	73.92
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	73.21	73.07
EER91618	Sorghum	plastid	74.8	71.95
TraesCS1B01G387800.2	Wheat	plasma membrane	67.26	67.66
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	47.22	59.65
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.35	54.51
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.96	54.0
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	54.76	52.67
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	51.59	49.52
TraesCS1B01G421100.1	Wheat	golgi	44.84	48.71
TraesCS6B01G324200.1	Wheat	plasma membrane	45.44	47.31
TraesCS7B01G449300.1	Wheat	plasma membrane	43.45	45.82
TraesCS4B01G274700.1	Wheat	plastid	43.25	45.51
TraesCS7B01G449000.1	Wheat	golgi	43.85	45.38
TraesCS7B01G113000.1	Wheat	golgi	44.05	45.21
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	39.68	44.44
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	36.71	44.36
TraesCS4B01G225500.1	Wheat	peroxisome	47.82	44.14
TraesCS3B01G488500.1	Wheat	plasma membrane	41.87	43.06
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.67	42.01
TraesCS4B01G297500.1	Wheat	golgi	44.84	41.85
TraesCS7B01G113200.1	Wheat	golgi	40.48	41.05
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	40.08	40.64
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	39.29	40.57
TraesCS7B01G006100.1	Wheat	mitochondrion	39.09	40.45
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	38.89	40.41
TraesCS6B01G372900.1	Wheat	golgi	40.08	40.16
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	36.11	39.74
TraesCS7B01G006300.1	Wheat	golgi	37.7	39.01
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	38.29	38.14
TraesCS1B01G443100.1	Wheat	cytosol	7.74	17.65

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF16	SUPFAM:SSF53901	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS6B01G473900	EnsemblPlants:TraesCS6B01G473900.1	TIGR:cd00831
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:720952087..720954665

Molecular Weight (calculated)

55869.8 Da

IEP (calculated)

9.242

GRAVY (calculated)

-0.005

Length

504 amino acids

Sequence
(BLAST)

001: MDRQLLRTVK QATKNHASLM YHRLVSHIPH LLAVTLLVAV APQLSTLTPD KARALWNTAV NAPALAMACW AAALAAYTYA SSRPQPVYLL DLAGYKPPAE
101: LEASRAKTIV HFWRCGRFSE QSMAFQKRML ERSGLGEATH FPMSLIRLPV DMCDRTAMEE SHAVIFGVVD EVLRKTGVAA GDVGVLIFNS SLLSPTPSFT
201: SLIVNRYKFR DDIVTHNLSG MGCSAGIIAI DLAKRLLQVH RNTYALVVST ENITLNAYMG NNRPMLVTNT LFRVGGAAIL LTNRAGDRAR SKYQLIHTVR
301: THRGAHDQSY GCVTQEEDEV GEVGVSLSKE LMAVAGEALK TNITTLGPLI LPMSEQLRFL ATVVLKKVFR AQVKAYLPDF KLALEHFCIH AGGRGVLDEL
401: ENSLKLSPWH MEPSRMTLYR FGNTSSSSLW YELAYCEAKR RIKKGDRVWQ IAFGSGFKCN SAVWRALRTI DDAGESPWTQ DIDVLPVDVP KVVPIDETSY
501: QVPI

Best Arabidopsis Sequence Match ( AT1G04220.1 )
(BLAST)

001: MNENHIQSDH MNNTIHVTNK KLPNFLLSVR LKYVKLGYHY LISNAVYILI LPVGLLAATS SSFSLTDLTL LYNHLLKFHF LSSTLFAALL IFLTTLYFTT
101: RPRRIFLLDF ACYKPDSSLI CTRETFMDRS QRVGIFTEDN LAFQQKILER SGLGQKTYFP EALLRVPPNP CMSEARKEAE TVMFGAIDAV LEKTGVNPKD
201: IGILVVNCSL FNPTPSLSAM IVNKYKLRGN VLSYNLGGMG CSAGLISIDL AKQLLQVQPN SYALVVSTEN ITLNWYLGND RSMLLSNCIF RMGGAAVLLS
301: NRSSDRCRSK YQLIHTVRTH KGSDDNAFNC VYQREDNDDN KQIGVSLSKN LMAIAGEALK TNITTLGPLV LPMSEQLLFF ATLVARKVFN VKKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE IEKNLDLSEW HMEPSRMTLN RFGNTSSSSL WYELAYSEAK GRIKRGDRTW QIAFGSGFKC NSAVWRALRT IDPSKEKKKK
501: TNPWIDEIHE FPVPVPRTSP VTSSSESR

Arabidopsis Description

KCS23-ketoacyl-CoA synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.