Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G279400.1 | Wheat | plasma membrane | 94.27 | 97.55 |
| TraesCS3D01G279300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 93.68 | 97.33 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 88.34 | 83.4 |
| Os01t0529800-01 | Rice | plasma membrane | 75.1 | 79.5 |
| EES03073 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 76.88 | 79.39 |
| Zm00001d009354_P001 | Maize | endoplasmic reticulum | 75.89 | 79.01 |
| TraesCS7B01G113000.1 | Wheat | golgi | 59.88 | 61.71 |
| TraesCS1B01G421100.1 | Wheat | golgi | 56.52 | 61.64 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 56.92 | 59.5 |
| TraesCS4B01G274700.1 | Wheat | plastid | 53.56 | 56.58 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 54.15 | 55.92 |
| TraesCS7B01G449000.1 | Wheat | golgi | 51.78 | 53.8 |
| TraesCS7B01G113200.1 | Wheat | golgi | 51.98 | 52.92 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 49.8 | 52.72 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 51.58 | 52.62 |
| KRH35956 | Soybean | plasma membrane | 51.58 | 52.62 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.59 | 52.46 |
| TraesCS6B01G372900.1 | Wheat | golgi | 51.98 | 52.29 |
| PGSC0003DMT400037757 | Potato | plastid | 47.23 | 51.84 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 50.59 | 51.61 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 50.4 | 51.41 |
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 49.41 | 51.23 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 49.8 | 51.22 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 50.2 | 51.21 |
| CDY42109 | Canola | plasma membrane | 50.2 | 51.11 |
| Bra024749.1-P | Field mustard | plasma membrane | 50.2 | 51.11 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 49.01 | 50.92 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 49.6 | 50.6 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 49.6 | 50.5 |
| AT1G25450.1 | Thale cress | plasma membrane | 49.01 | 50.41 |
| AT1G68530.1 | Thale cress | plasma membrane | 49.41 | 50.3 |
| Bra004034.1-P | Field mustard | plasma membrane | 48.81 | 50.2 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 49.21 | 50.2 |
| CDY04232 | Canola | plasma membrane | 49.21 | 50.1 |
| Solyc02g063140.2.1 | Tomato | golgi | 49.01 | 50.0 |
| CDY07381 | Canola | plasma membrane | 49.01 | 49.9 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 47.63 | 49.69 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 48.42 | 49.6 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 43.68 | 49.11 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 44.27 | 48.91 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 37.55 | 48.84 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 47.63 | 48.79 |
| TraesCS7B01G006300.1 | Wheat | golgi | 46.05 | 47.84 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 46.44 | 47.76 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 39.13 | 47.14 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 38.14 | 46.28 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 46.64 | 45.47 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 41.7 | 41.13 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 42.49 | 40.95 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 41.9 | 40.46 |
| TraesCS4B01G278800.1 | Wheat | golgi | 40.51 | 40.2 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 39.72 | 40.12 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 40.91 | 39.73 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 38.14 | 38.29 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 40.71 | 37.73 |
| TraesCS4B01G297500.1 | Wheat | golgi | 39.33 | 36.85 |
| TraesCS1B01G443100.1 | Wheat | cytosol | 6.32 | 14.48 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF9 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS3B01G313800 | EnsemblPlants:TraesCS3B01G313800.1 |
| TIGR:cd00831 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:504673287..504675195
Molecular Weight (calculated)
56323.8 Da
IEP (calculated)
8.514
GRAVY (calculated)
0.100
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSPHVKFL MMVSRLVVDN FFGVFAVAVA AAVVGRAWLI RPEEILDQML TLPRVYVFLA VILAAALEKM RRMRRLRDVY LVEYGCFRPK PCYRTPFATC
101: LEHAHLMPYL VDEESVAFAM RLLERSGLGE ETCVPDAYHY MPPDRSLKAS RDEAELVMFA AVDDVFAKTA VIKPADIDVL IVNCSIFTPV PVFADMVVNK
201: YKLRSDVKIM NLSGMGCSAG LVSVGLARKI LQVAPAGTRV LIVSTEILSS QYYVGTERAM LLPNCLFRMG AAAMILSNSP SEARFRLRRV VRTVTAARDA
301: DYRCVFQEED DKGNTGIRLS KDLATTAGYA LKNNIAAFGP LVLPATEQLL VALSLLKRRL LRGRAKVRLY RPDFRTAFEH ICIHAGGRGV IDEVQDGLGL
401: SDDDVEASRM TLHRFGNTSS SSVLYELAYL EAKGRMKKDD RVWMISFGAG FDCNSVSWEC VKPAGDADGP WAECIARYPV QLPEIDKDIR TTLASTVKVW
501: GNEFRR
101: LEHAHLMPYL VDEESVAFAM RLLERSGLGE ETCVPDAYHY MPPDRSLKAS RDEAELVMFA AVDDVFAKTA VIKPADIDVL IVNCSIFTPV PVFADMVVNK
201: YKLRSDVKIM NLSGMGCSAG LVSVGLARKI LQVAPAGTRV LIVSTEILSS QYYVGTERAM LLPNCLFRMG AAAMILSNSP SEARFRLRRV VRTVTAARDA
301: DYRCVFQEED DKGNTGIRLS KDLATTAGYA LKNNIAAFGP LVLPATEQLL VALSLLKRRL LRGRAKVRLY RPDFRTAFEH ICIHAGGRGV IDEVQDGLGL
401: SDDDVEASRM TLHRFGNTSS SSVLYELAYL EAKGRMKKDD RVWMISFGAG FDCNSVSWEC VKPAGDADGP WAECIARYPV QLPEIDKDIR TTLASTVKVW
501: GNEFRR
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.