Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G519400.1 | Wheat | plasma membrane | 88.71 | 90.19 |
| TraesCS7A01G532300.1 | Wheat | golgi | 86.65 | 88.1 |
| TraesCS7B01G449300.1 | Wheat | plasma membrane | 83.98 | 85.56 |
| TraesCSU01G166100.1 | Wheat | plasma membrane | 78.85 | 78.05 |
| Zm00001d045660_P001 | Maize | mitochondrion | 46.61 | 78.01 |
| TraesCS4B01G274700.1 | Wheat | plastid | 67.56 | 68.68 |
| EER89559 | Sorghum | mitochondrion, plasma membrane | 68.17 | 67.76 |
| TraesCS1B01G421100.1 | Wheat | golgi | 64.48 | 67.67 |
| TraesCS6B01G324200.1 | Wheat | plasma membrane | 66.74 | 67.15 |
| Os06t0262800-01 | Rice | plasma membrane | 67.35 | 66.4 |
| TraesCS7B01G113000.1 | Wheat | golgi | 65.5 | 64.97 |
| TraesCS3B01G488500.1 | Wheat | plasma membrane | 61.6 | 61.22 |
| TraesCS6B01G372900.1 | Wheat | golgi | 59.14 | 57.26 |
| KRH35956 | Soybean | plasma membrane | 56.88 | 55.85 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 56.88 | 55.85 |
| TraesCS7B01G113100.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.13 | 55.33 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 55.85 | 55.28 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 55.65 | 54.64 |
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 54.62 | 54.51 |
| PGSC0003DMT400037757 | Potato | plastid | 51.54 | 54.45 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 55.44 | 54.44 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 55.24 | 54.23 |
| TraesCS7B01G113200.1 | Wheat | golgi | 55.24 | 54.12 |
| TraesCS1B01G053700.1 | Wheat | endoplasmic reticulum | 55.03 | 53.92 |
| Bra004034.1-P | Field mustard | plasma membrane | 54.41 | 53.86 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 54.83 | 53.83 |
| CDY04232 | Canola | plasma membrane | 54.83 | 53.72 |
| CDY07381 | Canola | plasma membrane | 54.62 | 53.52 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 54.41 | 53.43 |
| TraesCS1B01G048000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 53.39 | 53.28 |
| CDY42109 | Canola | plasma membrane | 54.21 | 53.12 |
| Bra024749.1-P | Field mustard | plasma membrane | 54.21 | 53.12 |
| AT1G25450.1 | Thale cress | plasma membrane | 53.59 | 53.05 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 42.3 | 52.96 |
| AT1G68530.1 | Thale cress | plasma membrane | 54.0 | 52.92 |
| Solyc02g063140.2.1 | Tomato | golgi | 53.8 | 52.82 |
| TraesCS7B01G006100.1 | Wheat | mitochondrion | 52.16 | 52.16 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 52.77 | 52.02 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 44.76 | 51.9 |
| TraesCS3B01G313800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 53.8 | 51.78 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 52.16 | 51.42 |
| TraesCS6B01G373000.1 | Wheat | endoplasmic reticulum, golgi | 43.33 | 50.6 |
| TraesCS7B01G006300.1 | Wheat | golgi | 50.31 | 50.31 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 50.72 | 50.2 |
| TraesCS2B01G535700.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.02 | 50.0 |
| TraesCS2B01G535600.1 | Wheat | golgi, mitochondrion | 49.28 | 49.48 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 50.72 | 47.59 |
| TraesCS6B01G098300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 49.9 | 47.37 |
| TraesCS1B01G436300.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 49.49 | 45.9 |
| TraesCS7B01G254900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 48.87 | 45.68 |
| TraesCS6B01G207000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 48.05 | 44.66 |
| TraesCS4B01G278800.1 | Wheat | golgi | 46.61 | 44.51 |
| TraesCS6B01G473900.1 | Wheat | mitochondrion | 45.38 | 43.85 |
| TraesCS1B01G387800.2 | Wheat | plasma membrane | 44.97 | 43.71 |
| TraesCS4B01G297500.1 | Wheat | golgi | 42.3 | 38.15 |
| TraesCS4B01G225500.1 | Wheat | peroxisome | 42.51 | 37.91 |
| TraesCS1B01G443100.1 | Wheat | cytosol | 6.16 | 13.57 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | InterPro:ACP_syn_III_C |
| InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF18 | SUPFAM:SSF53901 | InterPro:Thiolase-like | EnsemblPlantsGene:TraesCS7B01G449000 | EnsemblPlants:TraesCS7B01G449000.1 | TIGR:cd00831 |
Description
No Description!
Coordinates
chr7B:+:711475553..711477225
Molecular Weight (calculated)
53598.4 Da
IEP (calculated)
9.173
GRAVY (calculated)
0.156
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSSPVKLKV VYRLIVDSFL AASCAAVLLR LGPAEIISCL RPVHLFSAAA AATVYLMLRP RAVYLVDYAC FDTSPLLRIP MASFIEHTKH TPTMSERSVR
101: FMSRLLARSG LGEETRLPEA HHFIPTHEYC TLENARTEFE LVVFSAIDDL LVKTGVTADA IGVLVLNCSL FCPTPSLVDI IVNKYNLCCD IRSVNLSGMG
201: CSAGLISVGL ARNLLQVVPR GSHALVVSTE TITPNYYVGN ERAMLLPNCL FRVGGVAALL STSPANARFR LKHVVRTFTG ANDDNAYRCV FQEEDEQGNV
301: GINLSKNLMA IAGASLQANI TRMGPLVLPV SEQLLFALSF VARKALRGAR IRPYIPDFSM AFKHLCIHAG GRAVIDELQK RLRLSDEQVE ASRMTLHRFG
401: NTSSSSPWYE LAYVEAKGRM RKGHRVWMIG FGSGFKCNSV VWECIQPAAR NIHGPWSTSI HRESLGSVVG YAVVQPNDSS SIPRINR
101: FMSRLLARSG LGEETRLPEA HHFIPTHEYC TLENARTEFE LVVFSAIDDL LVKTGVTADA IGVLVLNCSL FCPTPSLVDI IVNKYNLCCD IRSVNLSGMG
201: CSAGLISVGL ARNLLQVVPR GSHALVVSTE TITPNYYVGN ERAMLLPNCL FRVGGVAALL STSPANARFR LKHVVRTFTG ANDDNAYRCV FQEEDEQGNV
301: GINLSKNLMA IAGASLQANI TRMGPLVLPV SEQLLFALSF VARKALRGAR IRPYIPDFSM AFKHLCIHAG GRAVIDELQK RLRLSDEQVE ASRMTLHRFG
401: NTSSSSPWYE LAYVEAKGRM RKGHRVWMIG FGSGFKCNSV VWECIQPAAR NIHGPWSTSI HRESLGSVVG YAVVQPNDSS SIPRINR
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.