Factsheet for TraesCS7B01G113200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 2
golgi 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G208600.1	Wheat	cytosol	75.25	97.91
HORVU7Hr1G042040.1	Barley	golgi	91.95	92.14
TraesCS7A01G206000.1	Wheat	golgi	91.15	91.89
TraesCS7D01G208700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	84.51	90.91
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	75.86	77.25
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	75.65	75.65
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	73.84	75.2
OQU76197	Sorghum	golgi	62.98	65.34
TraesCS7B01G113000.1	Wheat	golgi	63.98	64.77
TraesCS6B01G324200.1	Wheat	plasma membrane	60.76	62.4
TraesCS1B01G421100.1	Wheat	golgi	57.55	61.64
TraesCS4B01G274700.1	Wheat	plastid	57.75	59.92
TraesCS3B01G488500.1	Wheat	plasma membrane	57.55	58.37
TraesCS6B01G372900.1	Wheat	golgi	57.34	56.66
TraesCS7B01G449300.1	Wheat	plasma membrane	54.12	56.28
TraesCS7B01G449000.1	Wheat	golgi	54.12	55.24
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.09	54.22
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	44.06	52.52
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	52.92	51.98
GSMUA_Achr3P07400_001	Banana	plasma membrane	40.64	51.93
PGSC0003DMT400037757	Potato	plastid	48.09	51.84
VIT_14s0006g02990.t01	Wine grape	plasma membrane	51.31	51.83
KRG90814	Soybean	cytosol, golgi, plasma membrane	51.71	51.81
KRH35956	Soybean	plasma membrane	50.91	51.01
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	50.7	50.81
Solyc02g085870.2.1	Tomato	plasma membrane	50.3	50.4
PGSC0003DMT400032993	Potato	plasma membrane	50.1	50.2
CDY42109	Canola	plasma membrane	50.1	50.1
Bra024749.1-P	Field mustard	plasma membrane	50.1	50.1
Solyc02g063140.2.1	Tomato	golgi	49.9	50.0
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	49.5	49.8
Bra004034.1-P	Field mustard	plasma membrane	49.3	49.8
CDY04232	Canola	plasma membrane	49.7	49.7
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	49.5	49.6
PGSC0003DMT400037714	Potato	plasma membrane	49.3	49.6
CDY07381	Canola	plasma membrane	49.5	49.5
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	49.3	49.4
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	45.47	49.34
TraesCS7B01G006100.1	Wheat	mitochondrion	48.29	49.28
AT1G68530.1	Thale cress	plasma membrane	49.09	49.09
GSMUA_Achr5P05870_001	Banana	plasma membrane	41.45	49.05
AT1G25450.1	Thale cress	plasma membrane	48.49	48.98
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	48.29	48.78
TraesCS7B01G006300.1	Wheat	golgi	47.48	48.46
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	46.68	47.84
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	49.7	47.59
TraesCS6B01G098300.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	45.07	43.66
TraesCS7B01G254900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	44.27	42.23
TraesCS6B01G207000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	44.47	42.18
TraesCS1B01G436300.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	44.47	42.1
TraesCS4B01G278800.1	Wheat	golgi	42.25	41.18
TraesCS6B01G473900.1	Wheat	mitochondrion	41.05	40.48
TraesCS1B01G387800.2	Wheat	plasma membrane	39.44	39.12
TraesCS4B01G297500.1	Wheat	golgi	41.65	38.33
TraesCS4B01G225500.1	Wheat	peroxisome	41.45	37.73
TraesCS1B01G443100.1	Wheat	cytosol	6.24	14.03

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0016747	InterPro:IPR016039	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561
PANTHER:PTHR31561:SF64	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	EnsemblPlantsGene:TraesCS7B01G113200	EnsemblPlants:TraesCS7B01G113200.1
TIGR:cd00831	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:130896914..130898407

Molecular Weight (calculated)

55001.8 Da

IEP (calculated)

9.630

GRAVY (calculated)

0.013

Length

497 amino acids

Sequence
(BLAST)

001: MNQSRKKVGT STPATMVSSP LHPNKHLLKP LYQLLVNNFI VVVGVPITAI SVLRKAAHLG PDELLTRLHD LRQVHIFLSV FLPFALVILY IMRRPRSVYL
101: VDYACCRPKP NCRVSMGSFT ENARNMPYLD DGSFRFLTRM LERSGLGDQT YLHPSLHNIP PRCSLSDSRD EAEQVIFAAI DDLLAKTGIS PGAIDIIVTN
201: CTAFNPTPSF TDMIINKYKL RSDIRDAHIS GMGCSAGVIS MEVARNFLQA APRGAHALVV STETTSLINY TGKNRAMLLP AVLFRMGAAA VLLSTSKSAS
301: RFRLTHVVRT LTAAQDRAYR CAYQEEDEEG QTGINLSKDL VAIAGETLKA NIVAIGSLVL PPSEKLLFAL SFVARKVLNR KIKLYVPDFR TAFQHFCIHS
401: GGRAVIDAVQ TSLCLSDEDV EPSRMTLHRF GNTSSSSLWY ELAYIEAKRR TRKGDRVWMV GFGSGFKCNS AVWECIRAPG NTTIGAPWAD SIHHYPV

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.