Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032993 Potato plasma membrane 98.79 98.79
Solyc02g063140.2.1 Tomato golgi 88.1 88.1
VIT_14s0006g02990.t01 Wine grape plasma membrane 85.28 85.98
KRG90814 Soybean cytosol, golgi, plasma membrane 84.88 84.88
KRH35956 Soybean plasma membrane 84.88 84.88
AT1G25450.1 Thale cress plasma membrane 82.86 83.54
AT1G68530.1 Thale cress plasma membrane 83.67 83.5
Bra004034.1-P Field mustard plasma membrane 82.26 82.93
CDY04232 Canola plasma membrane 82.46 82.29
CDY07381 Canola plasma membrane 82.46 82.29
KRH45255 Soybean endoplasmic reticulum, peroxisome, plasma membrane 81.85 81.85
Bra024749.1-P Field mustard plasma membrane 81.65 81.49
CDY42109 Canola plasma membrane 81.45 81.29
GSMUA_Achr2P21590_001 Banana golgi, peroxisome, plastid 61.69 79.27
GSMUA_Achr3P02180_001 Banana plasma membrane 55.65 78.19
EER92628 Sorghum plasma membrane 77.22 77.53
Os03t0220100-01 Rice golgi, mitochondrion 76.81 77.13
Zm00001d028241_P003 Maize endoplasmic reticulum, golgi, plasma membrane 76.21 76.52
GSMUA_Achr10P... Banana endoplasmic reticulum, golgi, plasma membrane 67.74 75.85
VIT_19s0093g00440.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 75.0 75.61
TraesCS4D01G242200.1 Wheat mitochondrion, plasma membrane 75.4 75.4
Solyc05g009270.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 75.0 75.3
TraesCS4A01G065300.1 Wheat mitochondrion, plasma membrane 75.0 75.0
HORVU4Hr1G067340.2 Barley golgi 75.4 74.65
Zm00001d048061_P001 Maize golgi 73.59 73.89
Solyc05g009280.2.1 Tomato golgi, plasma membrane, plastid 75.0 71.68
GSMUA_Achr3P07400_001 Banana plasma membrane 56.05 71.47
GSMUA_Achr8P30930_001 Banana endoplasmic reticulum, extracellular 55.24 70.98
Zm00001d045660_P001 Maize mitochondrion 40.93 69.76
Zm00001d037328_P001 Maize cytosol 49.6 67.03
GSMUA_Achr5P05870_001 Banana plasma membrane 53.83 63.57
Zm00001d051787_P001 Maize mitochondrion 59.88 61.24
KXG30818 Sorghum golgi, mitochondrion 60.08 61.19
Solyc04g080450.1.1 Tomato golgi, peroxisome, plasma membrane 62.5 59.96
Solyc09g083050.2.1 Tomato plasma membrane 61.9 59.84
Zm00001d017941_P001 Maize plasma membrane 59.48 59.84
TraesCS4D01G008100.1 Wheat plasma membrane 51.61 59.81
TraesCS6D01G274600.1 Wheat golgi, plasma membrane 58.27 59.71
TraesCS4B01G274700.1 Wheat plastid 57.66 59.71
TraesCS1B01G421100.1 Wheat golgi 55.85 59.7
TraesCS1D01G401000.1 Wheat plasma membrane 55.85 59.7
Solyc08g067410.1.1 Tomato plasma membrane 60.48 59.41
TraesCS1A01G392800.1 Wheat plasma membrane 55.65 59.35
HORVU0Hr1G038430.1 Barley endoplasmic reticulum, plasma membrane 55.04 59.35
HORVU6Hr1G073300.1 Barley golgi, plasma membrane 57.86 59.3
TraesCS6B01G324200.1 Wheat plasma membrane 57.86 59.3
Os02t0731900-01 Rice plasma membrane 59.88 59.28
TraesCS7A01G205700.1 Wheat golgi 58.67 59.27
TraesCS6A01G293700.1 Wheat golgi, plasma membrane 57.66 59.09
Solyc06g065560.1.1 Tomato nucleus 61.09 59.06
TraesCS7B01G113000.1 Wheat golgi 58.47 59.06
TraesCS4D01G273400.1 Wheat endoplasmic reticulum 57.46 59.01
Os06t0262800-01 Rice plasma membrane 58.67 58.91
TraesCS4A01G031500.1 Wheat plasma membrane 57.26 58.8
EER89559 Sorghum mitochondrion, plasma membrane 58.06 58.78
TraesCS7D01G208500.1 Wheat golgi 58.47 58.7
TraesCS7A01G032900.1 Wheat cytosol 40.73 58.38
KXG19727 Sorghum mitochondrion, plastid 57.86 58.22
TraesCS7D01G035700.1 Wheat plasma membrane 56.85 58.14
TraesCS7D01G519300.1 Wheat golgi, plasma membrane 55.44 57.53
TraesCS7D01G519400.1 Wheat plasma membrane 55.44 57.41
Solyc03g005320.2.1 Tomato plasma membrane 59.88 57.23
Solyc12g006820.1.1 Tomato plasma membrane 57.66 57.2
TraesCS4A01G303900.1 Wheat plasma membrane 56.65 57.11
TraesCSU01G166100.1 Wheat plasma membrane 56.65 57.11
TraesCS7D01G208600.1 Wheat cytosol 43.95 57.07
TraesCS7A01G532300.1 Wheat golgi 55.04 56.99
HORVU7Hr1G006910.1 Barley plasma membrane 55.85 56.88
TraesCS7B01G449300.1 Wheat plasma membrane 54.03 56.07
TraesCS7B01G449000.1 Wheat golgi 54.64 55.65
HORVU1Hr1G086760.1 Barley cytosol 55.85 54.85
Solyc06g053870.2.1 Tomato mitochondrion 53.63 54.73
Solyc05g013220.2.1 Tomato endoplasmic reticulum, golgi, plastid 54.23 54.56
KXG19733 Sorghum endoplasmic reticulum, plasma membrane, vacuole 52.82 54.47
TraesCS7D01G209400.1 Wheat cytosol 40.93 54.28
TraesCS6A01G341400.1 Wheat golgi 53.83 53.08
TraesCS6D01G321600.1 Wheat golgi 53.43 52.68
TraesCS3B01G488500.1 Wheat plasma membrane 52.02 52.65
TraesCS6B01G372900.1 Wheat golgi 53.23 52.49
TraesCS1D01G042300.1 Wheat golgi 50.4 52.3
TraesCS7D01G029500.1 Wheat plasma membrane 48.19 52.3
EES03073 Sorghum endoplasmic reticulum, golgi, plasma membrane 51.61 52.24
HORVU3Hr1G097570.1 Barley golgi 51.41 52.15
TraesCS3A01G279400.1 Wheat plasma membrane 51.41 52.15
TraesCS3A01G451100.1 Wheat plasma membrane 51.41 52.15
TraesCS1A01G040900.1 Wheat golgi 50.2 52.09
TraesCS1A01G037600.1 Wheat endoplasmic reticulum, golgi, plasma membrane 51.21 52.05
TraesCS7A01G532200.1 Wheat cytosol 10.89 51.92
Os01t0529800-01 Rice plasma membrane 50.0 51.88
TraesCS3D01G279300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.81 51.75
TraesCS3D01G444000.1 Wheat golgi 51.01 51.74
TraesCS7D01G102300.1 Wheat mitochondrion 30.24 51.72
Zm00001d009354_P001 Maize endoplasmic reticulum 50.6 51.65
TraesCS2D01G508000.1 Wheat mitochondrion 33.06 51.57
OQU76197 Sorghum golgi 49.8 51.57
TraesCS7D01G208800.1 Wheat endoplasmic reticulum 50.4 51.55
TraesCS1D01G039200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.4 51.44
TraesCS4A01G456600.1 Wheat plasma membrane 46.98 51.43
Solyc10g009240.2.1 Tomato peroxisome 54.84 51.42
TraesCS7D01G089200.1 Wheat endoplasmic reticulum, plasma membrane 48.99 51.37
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.4 51.23
TraesCS7A01G108300.1 Wheat plasma membrane 46.17 51.12
EER89567 Sorghum endoplasmic reticulum, golgi, plastid 46.98 51.1
HORVU6Hr1G082270.1 Barley golgi 52.62 50.98
TraesCS7A01G206000.1 Wheat golgi 50.4 50.71
Solyc06g053900.2.1 Tomato cytosol, plasma membrane, plastid 50.6 50.71
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 50.81 50.7
EES00849 Sorghum endoplasmic reticulum, golgi 50.4 50.61
HORVU7Hr1G042040.1 Barley golgi 50.6 50.6
Zm00001d044580_P001 Maize mitochondrion 49.6 50.51
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.77 50.44
EER88189 Sorghum endoplasmic reticulum, plasma membrane, vacuole 48.99 50.41
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.6 50.41
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 42.34 50.36
TraesCS7B01G113200.1 Wheat golgi 50.4 50.3
TraesCS7A01G205800.1 Wheat endoplasmic reticulum, golgi, vacuole 45.56 50.22
HORVU6Hr1G094160.2 Barley endoplasmic reticulum, golgi, plasma membrane 49.6 50.2
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 51.21 50.2
HORVU7Hr1G023540.1 Barley mitochondrion 28.83 50.18
HORVU7Hr1G042050.1 Barley golgi 49.19 50.1
Os06t0260500-00 Rice mitochondrion 53.23 50.09
HORVU6Hr1G004830.1 Barley golgi 49.6 49.6
HORVU7Hr1G023280.1 Barley plasma membrane 45.16 49.56
TraesCS7D01G208700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.97 49.35
Zm00001d044579_P001 Maize golgi 48.79 48.99
TraesCS6A01G024400.1 Wheat plasma membrane 47.78 48.47
TraesCS2A01G014600.1 Wheat plasma membrane 48.39 48.39
TraesCS6A01G025200.1 Wheat plasma membrane 47.38 48.25
TraesCS5D01G089800.1 Wheat golgi 47.38 48.06
TraesCS7D01G102900.1 Wheat golgi, plasma membrane, plastid 45.77 47.29
TraesCS5A01G076500.1 Wheat golgi 46.77 47.25
TraesCS4D01G008200.1 Wheat plasma membrane 46.57 46.95
HORVU5Hr1G087530.1 Barley plasma membrane 45.97 46.91
TraesCS7B01G006100.1 Wheat mitochondrion 45.97 46.82
TraesCS2D01G508300.1 Wheat endoplasmic reticulum, plasma membrane 43.35 46.64
TraesCS2A01G507700.1 Wheat golgi, plasma membrane 42.94 46.51
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 42.94 46.51
HORVU3Hr1G069880.2 Barley mitochondrion, plastid 50.2 46.46
Solyc08g067260.2.1 Tomato cytosol, peroxisome, plasma membrane 47.38 46.44
TraesCS2D01G508200.1 Wheat plasma membrane, plastid 42.74 46.29
TraesCS7D01G102000.1 Wheat mitochondrion, plastid 46.37 46.28
TraesCS7A01G108000.1 Wheat golgi, plasma membrane, plastid 44.76 46.25
TraesCS1A01G439000.1 Wheat plasma membrane 46.57 46.2
TraesCS7D01G102800.1 Wheat endoplasmic reticulum, plasma membrane, plastid 41.73 46.1
TraesCS7A01G107700.1 Wheat mitochondrion, plastid 46.17 46.08
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 44.96 45.98
TraesCS7B01G006300.1 Wheat golgi 44.96 45.79
HORVU2Hr1G112840.1 Barley endoplasmic reticulum, golgi 43.15 45.73
HORVU7Hr1G022720.1 Barley plasma membrane 33.06 45.68
TraesCS7D01G102400.1 Wheat endoplasmic reticulum, plastid, vacuole 44.15 45.62
HORVU5Hr1G122360.1 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.96 45.14
Solyc09g065800.2.1 Tomato endoplasmic reticulum, plasma membrane 40.32 44.35
TraesCS5D01G017000.1 Wheat endoplasmic reticulum, golgi, plastid 41.94 44.07
TraesCS7A01G107900.1 Wheat golgi, mitochondrion 42.34 44.03
HORVU7Hr1G022580.1 Barley golgi, mitochondrion 32.26 43.84
HORVU7Hr1G030880.1 Barley plasma membrane 43.75 43.49
HORVU7Hr1G022780.1 Barley golgi, mitochondrion 40.73 42.62
Solyc09g065780.2.1 Tomato endoplasmic reticulum, golgi 37.9 42.53
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0016747InterPro:IPR016039UniProt:K4BB98PFAM:PF08392
PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561PANTHER:PTHR31561:SF5SUPFAM:SSF53901EnsemblPlantsGene:Solyc02g085870.2
EnsemblPlants:Solyc02g085870.2.1TMHMM:TMhelixInterPro:Thiolase-likeUniParc:UPI00027675DA::
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4BB98]
Coordinates
chr2:+:48651127..48653367
Molecular Weight (calculated)
55840.7 Da
IEP (calculated)
9.158
GRAVY (calculated)
0.062
Length
496 amino acids
Sequence
(BLAST)
001: MPEPVPNFSN SVKLKYVKLG YQYLVNNFLT FLIVPIMAAL IIQVLKLGPE EIVSIWNSLH FDLLQILCSS FLIIFIATVY FMSKPRSIYL VDYSCYKAPV
101: TCRVPFSTFM EHSRLILKDN PKSVEFQMRI LERSGLGEET CLPPAIHYIP PTPTMETARN EAEVVIFSAI DDLMKKTGLK PKDIDILVVN CSLFSPTPSL
201: SAMVVNKYKL RSNIKSYNLS GMGCSAGLIS IDLARDLLQV LPNSCALVVS TEIITPNYYQ GSERAMLLPN CLFRMGGAAI LLSNKRKDSA RAKYRLMHVV
301: RTHKGADDKA FKCVFQQEDP QGKVGINLSK DLMVIAGEAL KSNITTIGPL VLPASEQLLF LFTLIGRKIF NPKWKAYIPD FKQAFEHFCI HAGGRAVIDE
401: LQKNLQLSAE HVEASRMTLH KFGNTSSSSL WYEMSYIEAK GRMKKGDRIW QIAFGSGFKC NSAVWKCNRT IKTPTDGPWD DCIDRYPVFI PEIVKL
Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.