Factsheet for Zm00001d037328_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045660_P001	Maize	mitochondrion	67.85	85.57
KXG19727	Sorghum	mitochondrion, plastid	96.19	71.6
TraesCS7A01G205700.1	Wheat	golgi	89.37	66.8
TraesCS7B01G113000.1	Wheat	golgi	88.83	66.4
TraesCS7D01G208500.1	Wheat	golgi	88.83	65.99
Zm00001d051787_P001	Maize	mitochondrion	85.01	64.33
Os06t0260500-00	Rice	mitochondrion	92.37	64.33
Zm00001d017941_P001	Maize	plasma membrane	83.65	62.27
KRH35956	Soybean	plasma membrane	69.21	51.21
Zm00001d009354_P001	Maize	endoplasmic reticulum	67.57	51.03
KRG90814	Soybean	cytosol, golgi, plasma membrane	68.94	51.01
PGSC0003DMT400037757	Potato	plastid	64.03	50.98
VIT_14s0006g02990.t01	Wine grape	plasma membrane	68.12	50.81
Zm00001d048061_P001	Maize	golgi	68.12	50.61
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	67.85	50.4
Zm00001d044580_P001	Maize	mitochondrion	66.76	50.31
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	67.57	50.0
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	67.57	50.0
Bra004034.1-P	Field mustard	plasma membrane	66.76	49.8
Solyc02g085870.2.1	Tomato	plasma membrane	67.03	49.6
CDY04232	Canola	plasma membrane	67.03	49.5
PGSC0003DMT400032993	Potato	plasma membrane	66.76	49.4
Zm00001d044579_P001	Maize	golgi	66.48	49.39
CDY07381	Canola	plasma membrane	66.76	49.3
Bra024749.1-P	Field mustard	plasma membrane	66.48	49.09
AT1G68530.1	Thale cress	plasma membrane	66.48	49.09
CDY42109	Canola	plasma membrane	66.48	49.09
Solyc02g063140.2.1	Tomato	golgi	66.21	48.99
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	66.21	48.99
AT1G25450.1	Thale cress	plasma membrane	65.12	48.58
PGSC0003DMT400037714	Potato	plasma membrane	64.85	48.18
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	63.76	47.37
GSMUA_Achr3P07400_001	Banana	plasma membrane	49.86	47.04
GSMUA_Achr5P05870_001	Banana	plasma membrane	53.41	46.67
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	62.13	46.34
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	63.22	44.7
Zm00001d009608_P001	Maize	plasma membrane	59.95	43.56
Zm00001d039053_P001	Maize	plasma membrane	59.67	42.61
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	59.95	42.55
Zm00001d039094_P001	Maize	cytosol	58.58	42.24
Zm00001d048953_P001	Maize	mitochondrion, plastid	57.49	41.13
Zm00001d046444_P001	Maize	plasma membrane	57.22	40.78
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	58.58	40.19
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	53.95	40.0
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	54.22	39.41
Zm00001d027766_P001	Maize	mitochondrion	55.86	38.75
Zm00001d047931_P001	Maize	peroxisome	57.22	38.46
Zm00001d028406_P001	Maize	peroxisome	56.68	38.03
Zm00001d027904_P001	Maize	plastid	50.95	34.44

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:100382314	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	ProteinID:AQK83621.1	EMBL:BT063873	UniProt:C0P6F4	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039
PFAM:PF08392	PFAM:PF08541	PANTHER:PTHR31561	PANTHER:PTHR31561:SF64	SUPFAM:SSF53901	InterPro:Thiolase-like
UniParc:UPI0001948C67	EnsemblPlantsGene:Zm00001d037328	EnsemblPlants:Zm00001d037328_P001	EnsemblPlants:Zm00001d037328_T001	:	:

Description

3-ketoacyl-CoA synthase

Coordinates

chr6:+:121453440..121454543

Molecular Weight (calculated)

40310.8 Da

IEP (calculated)

8.559

GRAVY (calculated)

0.022

Length

367 amino acids

Sequence
(BLAST)

001: MTRLLERSGL GEETCLPPAH HYIPPYRNME ASRAEVELVI FSAIDDLLAK TGISPSAIDI LVVNCSLFAP VPSFTDMVIN RYGMRPDVRN VHLSGMGCSA
101: GLISVGLARN LLQVAGRGAH ALVVSTETIT PNYYVGKERA MLLPNCLFRI GGAAVLLSTS RSRARFRLAR VVRTLTGAQD SAYRCVFQEE DGEGHRGINL
201: SKDLMTIAGD ALKANITAIG PLVLPASEQL LFALSFIARR VLNRRVKPYL PDFRTAFEHF CIHAGGRAVI DELQRSLGLS DEDVEASRMA LHRFGNTSSS
301: SVWYELAYIE AKGRMRRGDR VWMIGFGSGF KCNSAAWECI APARTAEGPW AESVSRYPVD IPEVLKH

Best Arabidopsis Sequence Match ( AT1G19440.1 )
(BLAST)

001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY

Arabidopsis Description

KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.