Factsheet for Zm00001d027766_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
endoplasmic reticulum 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95458	Sorghum	mitochondrion	88.28	88.28
TraesCS4B01G278800.1	Wheat	golgi	71.08	73.73
TraesCS4A01G025300.1	Wheat	golgi	70.89	73.67
TraesCS4D01G277300.1	Wheat	golgi	70.89	73.67
HORVU4Hr1G073840.2	Barley	golgi	70.51	73.28
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	62.19	66.46
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	62.76	65.74
Zm00001d045660_P001	Maize	mitochondrion	33.27	60.48
Zm00001d037328_P001	Maize	cytosol	38.75	55.86
Zm00001d039094_P001	Maize	cytosol	53.31	55.4
Zm00001d048953_P001	Maize	mitochondrion, plastid	53.31	54.97
GSMUA_Achr6P23320_001	Banana	endoplasmic reticulum, golgi, vacuole	41.4	54.89
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	53.12	54.35
Zm00001d046444_P001	Maize	plasma membrane	51.23	52.62
Zm00001d048061_P001	Maize	golgi	48.96	52.43
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	47.45	50.81
Zm00001d051787_P001	Maize	mitochondrion	45.94	50.1
Zm00001d009608_P001	Maize	plasma membrane	47.83	50.1
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	49.34	48.78
Zm00001d017941_P001	Maize	plasma membrane	45.18	48.48
Zm00001d039053_P001	Maize	plasma membrane	46.88	48.25
Zm00001d044580_P001	Maize	mitochondrion	43.1	46.82
Zm00001d028406_P001	Maize	peroxisome	47.26	45.7
Zm00001d047931_P001	Maize	peroxisome	47.07	45.6
Zm00001d009354_P001	Maize	endoplasmic reticulum	41.21	44.86
Zm00001d044579_P001	Maize	golgi	41.59	44.53
Zm00001d027904_P001	Maize	plastid	41.4	40.33

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:103631752	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
UniProt:A0A1D6JPE7	InterPro:ACP_syn_III_C	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	ProteinID:ONL93881.1
PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF13	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI00022145D3	EnsemblPlantsGene:Zm00001d027766	EnsemblPlants:Zm00001d027766_P001	EnsemblPlants:Zm00001d027766_T001	SEG:seg

Description

3-ketoacyl-CoA synthase 2

Coordinates

chr1:+:13137072..13140293

Molecular Weight (calculated)

57125.7 Da

IEP (calculated)

10.021

GRAVY (calculated)

0.027

Length

529 amino acids

Sequence
(BLAST)

001: MASLNQHRSM ATDRELFRTV RQAALNHARQ LYHRLVRRLP HLLAVTLVVG AVQLVPPSSA PLPPLGALLR EAAARARADA GLVAAAAAGL AAAACAYAAS
101: RPRPVYLVEL AAYRPGPAHR ATRAESVRHF ARAGRFTDES VAFQTRMLER AGVGDATHFP ASILAFPVDM SLRAAREESE AVVFGVVDGV LAAAAVRAAD
201: IGVVIVNSSL FSPTPSFTSL LVSRYGLRHD VVTHNLSGMG CSASIIAIDL AKHLLQVHPE TYALVVSTEN ITLNAYLGNH RPMLVTNTLF RMGGAAVLLS
301: NRRADRARAR YRLVHTVRTH RGGASDESYA CVTQEEDAEG NVGVSLSRGL MSVAGDALRS NITALGPLVL PLSEQLRFLA AALLRRVAAV KPYVPDFKLA
401: LEHFCIHAGG RGVLDELERS LGLSAWHMEP SRMTLYRFGN TSSSSLWYEL AYCEAKGRIK RGDRVWQIAF GSGFKCNSAV WKALRTVDDA GRRDTNPWAD
501: DIHDLPVHVP KVSPFASSDQ APPTNAQHA

Best Arabidopsis Sequence Match ( AT1G01120.1 )
(BLAST)

001: MERTNSIEMD RERLTAEMAF RDSSSAVIRI RRRLPDLLTS VKLKYVKLGL HNSCNVTTIL FFLIILPLTG TVLVQLTGLT FDTFSELWSN QAVQLDTATR
101: LTCLVFLSFV LTLYVANRSK PVYLVDFSCY KPEDERKISV DSFLTMTEEN GSFTDDTVQF QQRISNRAGL GDETYLPRGI TSTPPKLNMS EARAEAEAVM
201: FGALDSLFEK TGIKPAEVGI LIVNCSLFNP TPSLSAMIVN HYKMREDIKS YNLGGMGCSA GLISIDLANN LLKANPNSYA VVVSTENITL NWYFGNDRSM
301: LLCNCIFRMG GAAILLSNRR QDRKKSKYSL VNVVRTHKGS DDKNYNCVYQ KEDERGTIGV SLARELMSVA GDALKTNITT LGPMVLPLSE QLMFLISLVK
401: RKMFKLKVKP YIPDFKLAFE HFCIHAGGRA VLDEVQKNLD LKDWHMEPSR MTLHRFGNTS SSSLWYEMAY TEAKGRVKAG DRLWQIAFGS GFKCNSAVWK
501: ALRPVSTEEM TGNAWAGSID QYPVKVVQ

Arabidopsis Description

KCS13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.