Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009354_P001 | Maize | endoplasmic reticulum | 69.84 | 70.99 |
| Zm00001d045660_P001 | Maize | mitochondrion | 40.69 | 69.07 |
| Zm00001d044580_P001 | Maize | mitochondrion | 68.02 | 68.99 |
| Zm00001d037328_P001 | Maize | cytosol | 49.39 | 66.48 |
| HORVU5Hr1G122360.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 60.93 | 60.93 |
| HORVU5Hr1G087530.1 | Barley | plasma membrane | 59.72 | 60.7 |
| Zm00001d051787_P001 | Maize | mitochondrion | 59.11 | 60.21 |
| TraesCS1A01G439000.1 | Wheat | plasma membrane | 60.73 | 60.0 |
| Zm00001d017941_P001 | Maize | plasma membrane | 58.7 | 58.82 |
| Zm00001d028241_P003 | Maize | endoplasmic reticulum, golgi, plasma membrane | 50.81 | 50.81 |
| Zm00001d048061_P001 | Maize | golgi | 50.4 | 50.4 |
| PGSC0003DMT400037757 | Potato | plastid | 46.96 | 50.33 |
| KRH35956 | Soybean | plasma membrane | 50.2 | 50.0 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 49.8 | 49.6 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 48.99 | 49.19 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 38.66 | 49.1 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 48.99 | 48.79 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 48.99 | 48.79 |
| CDY42109 | Canola | plasma membrane | 48.99 | 48.69 |
| Bra024749.1-P | Field mustard | plasma membrane | 48.99 | 48.69 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 48.79 | 48.59 |
| Bra004034.1-P | Field mustard | plasma membrane | 48.18 | 48.37 |
| CDY07381 | Canola | plasma membrane | 48.38 | 48.09 |
| CDY04232 | Canola | plasma membrane | 48.38 | 48.09 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 48.18 | 47.98 |
| Solyc02g063140.2.1 | Tomato | golgi | 47.77 | 47.58 |
| AT1G25450.1 | Thale cress | plasma membrane | 47.17 | 47.36 |
| AT1G68530.1 | Thale cress | plasma membrane | 47.57 | 47.28 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 47.37 | 47.18 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 39.88 | 46.9 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 46.76 | 46.76 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 46.36 | 46.36 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 45.75 | 45.94 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 47.37 | 45.09 |
| Zm00001d009608_P001 | Maize | plasma membrane | 44.94 | 43.96 |
| Zm00001d039053_P001 | Maize | plasma membrane | 45.34 | 43.58 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 43.52 | 41.91 |
| Zm00001d027766_P001 | Maize | mitochondrion | 44.53 | 41.59 |
| Zm00001d039094_P001 | Maize | cytosol | 41.7 | 40.47 |
| Zm00001d016438_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 42.31 | 40.43 |
| Zm00001d032948_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 40.08 | 40.0 |
| Zm00001d014168_P001 | Maize | peroxisome, plasma membrane, plastid | 40.89 | 40.0 |
| Zm00001d046444_P001 | Maize | plasma membrane | 40.49 | 38.84 |
| Zm00001d030343_P001 | Maize | cytosol, peroxisome, plasma membrane | 41.9 | 38.69 |
| Zm00001d047931_P001 | Maize | peroxisome | 40.69 | 36.81 |
| Zm00001d028406_P001 | Maize | peroxisome | 40.28 | 36.38 |
| Zm00001d027904_P001 | Maize | plastid | 39.88 | 36.28 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | EntrezGene:100272813 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 |
| InterPro:ACP_syn_III_C | UniProt:B4FQV8 | EMBL:BT039496 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| InterPro:IPR016039 | ProteinID:ONM41788.1 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 |
| PANTHER:PTHR31561:SF9 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI00017B77AE | EnsemblPlantsGene:Zm00001d044579 |
| EnsemblPlants:Zm00001d044579_P001 | EnsemblPlants:Zm00001d044579_T001 | SEG:seg | : | : | : |
Description
3-ketoacyl-CoA synthase
Coordinates
chr3:-:232296730..232298214
Molecular Weight (calculated)
54302.0 Da
IEP (calculated)
8.469
GRAVY (calculated)
0.194
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGSSSSRK AKALKASYRL VADNFLAVLA MVSVVAVLFA AWPISIEDLA CRLHAVRPLH VLTAAILTAA LAKLRRMSRP SDVYLVEYGC FWPKPCFRAP
101: FATCLEHVRL LPYLVNEDDI SWGWRLLQRS GIGEETCVPY AYHYLPPDRS FRASLDETEL VIFSAVDDVF ARTTAVTPAD IGVVIVNCSI FTPTPVFTDM
201: IVNRYKLRAD VRSVNLSGMG CSAALISIGL ARNMLQVAPP GTHALIVSTE ILSSQYYVGM DRSMLLPNCL FRMGAAAMIM SNTAARGARF RLARVVRTVA
301: SARDAAYRCV FQVEDEESNT GIRLSKDLVP TAAQTLKSNI VAFGPLVLPA SEKLLVALSI LRRRLVQSSR GRVYRPDFRT AFEHFCIHAG GRGVIDEVQR
401: GLGLSDEDVE ASRMTLHRFG NTSSSSVVYE LAYIEAKGSM RKGDRVWMIS FGAGFDCSSV AWECIEPAAD AAGPWADCIH RYPVQLPKLM EALD
101: FATCLEHVRL LPYLVNEDDI SWGWRLLQRS GIGEETCVPY AYHYLPPDRS FRASLDETEL VIFSAVDDVF ARTTAVTPAD IGVVIVNCSI FTPTPVFTDM
201: IVNRYKLRAD VRSVNLSGMG CSAALISIGL ARNMLQVAPP GTHALIVSTE ILSSQYYVGM DRSMLLPNCL FRMGAAAMIM SNTAARGARF RLARVVRTVA
301: SARDAAYRCV FQVEDEESNT GIRLSKDLVP TAAQTLKSNI VAFGPLVLPA SEKLLVALSI LRRRLVQSSR GRVYRPDFRT AFEHFCIHAG GRGVIDEVQR
401: GLGLSDEDVE ASRMTLHRFG NTSSSSVVYE LAYIEAKGSM RKGDRVWMIS FGAGFDCSSV AWECIEPAAD AAGPWADCIH RYPVQLPKLM EALD
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.