Factsheet for Zm00001d048061_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	93.52	93.52
EER92628	Sorghum	plasma membrane	93.52	93.52
Os03t0220100-01	Rice	golgi, mitochondrion	88.87	88.87
TraesCS4D01G242200.1	Wheat	mitochondrion, plasma membrane	87.04	86.69
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	86.44	86.09
HORVU4Hr1G067340.2	Barley	golgi	87.04	85.83
GSMUA_Achr3P02180_001	Banana	plasma membrane	58.1	81.3
GSMUA_Achr2P21590_001	Banana	golgi, peroxisome, plastid	62.96	80.57
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi, plasma membrane	69.43	77.43
VIT_14s0006g02990.t01	Wine grape	plasma membrane	75.71	76.02
KRH35956	Soybean	plasma membrane	76.11	75.81
KRG90814	Soybean	cytosol, golgi, plasma membrane	74.9	74.6
VIT_01s0011g03490.t01	Wine grape	cytosol, golgi, plasma membrane	74.49	74.19
PGSC0003DMT400032993	Potato	plasma membrane	74.09	73.79
Solyc02g085870.2.1	Tomato	plasma membrane	73.89	73.59
AT1G68530.1	Thale cress	plasma membrane	73.89	73.44
GSMUA_Achr8P30930_001	Banana	endoplasmic reticulum, extracellular	57.29	73.32
Bra004034.1-P	Field mustard	plasma membrane	72.87	73.17
CDY04232	Canola	plasma membrane	73.28	72.84
CDY07381	Canola	plasma membrane	73.08	72.64
PGSC0003DMT400062136	Potato	cytosol, golgi, plasma membrane	72.47	72.18
KRH45255	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	72.47	72.18
Solyc02g063140.2.1	Tomato	golgi	72.06	71.77
AT1G25450.1	Thale cress	plasma membrane	71.46	71.75
Bra024749.1-P	Field mustard	plasma membrane	71.86	71.43
CDY42109	Canola	plasma membrane	71.86	71.43
PGSC0003DMT400037757	Potato	plastid	65.18	69.85
Zm00001d045660_P001	Maize	mitochondrion	40.89	69.42
Zm00001d037328_P001	Maize	cytosol	50.61	68.12
PGSC0003DMT400037714	Potato	plasma membrane	67.41	67.41
VIT_19s0093g00440.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	66.6	66.87
Solyc05g009270.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	65.79	65.79
Zm00001d009608_P001	Maize	plasma membrane	67.21	65.74
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	67.81	64.55
Zm00001d039053_P001	Maize	plasma membrane	66.6	64.01
Zm00001d051787_P001	Maize	mitochondrion	61.74	62.89
Zm00001d016438_P001	Maize	endoplasmic reticulum, peroxisome, plasma membrane	64.78	61.9
Zm00001d017941_P001	Maize	plasma membrane	60.53	60.65
Zm00001d046444_P001	Maize	plasma membrane	62.55	60.0
Zm00001d039094_P001	Maize	cytosol	61.34	59.53
Zm00001d048953_P001	Maize	mitochondrion, plastid	56.68	54.58
Zm00001d009354_P001	Maize	endoplasmic reticulum	50.81	51.65
Zm00001d030343_P001	Maize	cytosol, peroxisome, plasma membrane	55.67	51.4
Zm00001d044580_P001	Maize	mitochondrion	50.4	51.13
Zm00001d044579_P001	Maize	golgi	50.4	50.4
Zm00001d032948_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	50.2	50.1
Zm00001d027904_P001	Maize	plastid	54.45	49.54
Zm00001d028406_P001	Maize	peroxisome	54.25	48.99
Zm00001d027766_P001	Maize	mitochondrion	52.43	48.96
Zm00001d014168_P001	Maize	peroxisome, plasma membrane, plastid	50.0	48.91
Zm00001d047931_P001	Maize	peroxisome	54.05	48.9

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	EntrezGene:103639429	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1
InterPro:ACP_syn_III_C	ProteinID:AQL08612.1	InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
UniProt:K7VKG9	PFAM:PF08392	PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF5
SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000189D550	EnsemblPlantsGene:Zm00001d048061	EnsemblPlants:Zm00001d048061_P001
EnsemblPlants:Zm00001d048061_T001	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA synthase

Coordinates

chr9:+:149108412..149109896

Molecular Weight (calculated)

55168.2 Da

IEP (calculated)

9.433

GRAVY (calculated)

-0.016

Length

494 amino acids

Sequence
(BLAST)

001: MPTGGVFSGS VNLKHVKLGY RYLLDHLLTL LLVPVMAATA LELARLGPGE LLSLWRSLEL DLVHILCSAF VAVFAGTVYA MSRPRPVYLV DYACYKPPGS
101: CRVPFATFME HTRLISDDDR SVRFQTRILE RSGLGEDTCL PPANHFIPPN PSMEASRAEA QLVVFSAIDD LLRRTGTKPK DVDILVVNCS LFSPTPSLSA
201: MVVNRYKLRS NVRSFNLSGM GCSAGLISID LARDMLQVHP NSNALVVSTE IITPNFYRGS RRDMLLPNCL FRMGAAAILL SNRRREAPRA KYRLVHVVRT
301: HKGADDRAYR CVYQEEDQQG FSGISLSKEL MAIAGDALKS NITTIGPLVL PMSEQLLFFF RLVGRKLLNG GWKPYIPDFK LAFDHFCIHA GGRAVIDELQ
401: KNLQLSPRHV EASRMTLHRF GNTSSSSLWY ELAYIEAKGR MRRGDRVWQI GFGSGFKCNS AVWKCLRSVN TPTSGPWDDC IHRYPVDVPE VVSL

Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)

001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL

Arabidopsis Description

CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.