Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92628 | Sorghum | plasma membrane | 98.18 | 98.18 |
| Zm00001d048061_P001 | Maize | golgi | 93.52 | 93.52 |
| Os03t0220100-01 | Rice | golgi, mitochondrion | 93.32 | 93.32 |
| TraesCS4D01G242200.1 | Wheat | mitochondrion, plasma membrane | 91.09 | 90.73 |
| TraesCS4A01G065300.1 | Wheat | mitochondrion, plasma membrane | 90.28 | 89.92 |
| HORVU4Hr1G067340.2 | Barley | golgi | 90.69 | 89.42 |
| GSMUA_Achr3P02180_001 | Banana | plasma membrane | 59.72 | 83.57 |
| GSMUA_Achr2P21590_001 | Banana | golgi, peroxisome, plastid | 64.78 | 82.9 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi, plasma membrane | 72.67 | 81.04 |
| KRH35956 | Soybean | plasma membrane | 79.55 | 79.23 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 78.14 | 78.46 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 78.34 | 78.02 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 77.33 | 77.02 |
| GSMUA_Achr8P30930_001 | Banana | endoplasmic reticulum, extracellular | 59.92 | 76.68 |
| Bra004034.1-P | Field mustard | plasma membrane | 76.32 | 76.63 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 76.92 | 76.61 |
| AT1G68530.1 | Thale cress | plasma membrane | 76.92 | 76.46 |
| CDY04232 | Canola | plasma membrane | 76.72 | 76.26 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 76.52 | 76.21 |
| CDY07381 | Canola | plasma membrane | 76.52 | 76.06 |
| AT1G25450.1 | Thale cress | plasma membrane | 75.1 | 75.41 |
| Bra024749.1-P | Field mustard | plasma membrane | 75.51 | 75.05 |
| CDY42109 | Canola | plasma membrane | 75.51 | 75.05 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 75.1 | 74.8 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 75.1 | 74.8 |
| Solyc02g063140.2.1 | Tomato | golgi | 74.49 | 74.19 |
| PGSC0003DMT400037757 | Potato | plastid | 67.0 | 71.8 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 69.84 | 69.84 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 68.62 | 68.62 |
| Zm00001d045660_P001 | Maize | mitochondrion | 40.28 | 68.38 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 68.02 | 68.29 |
| Zm00001d037328_P001 | Maize | cytosol | 50.4 | 67.85 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 70.04 | 66.67 |
| Zm00001d009608_P001 | Maize | plasma membrane | 65.59 | 64.16 |
| Zm00001d039053_P001 | Maize | plasma membrane | 66.19 | 63.62 |
| Zm00001d051787_P001 | Maize | mitochondrion | 61.94 | 63.09 |
| Zm00001d017941_P001 | Maize | plasma membrane | 61.13 | 61.26 |
| Zm00001d016438_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 63.97 | 61.12 |
| Zm00001d046444_P001 | Maize | plasma membrane | 62.35 | 59.81 |
| Zm00001d039094_P001 | Maize | cytosol | 60.12 | 58.35 |
| Zm00001d048953_P001 | Maize | mitochondrion, plastid | 57.29 | 55.17 |
| Zm00001d009354_P001 | Maize | endoplasmic reticulum | 51.01 | 51.85 |
| Zm00001d044580_P001 | Maize | mitochondrion | 51.01 | 51.75 |
| Zm00001d044579_P001 | Maize | golgi | 50.81 | 50.81 |
| Zm00001d030343_P001 | Maize | cytosol, peroxisome, plasma membrane | 54.25 | 50.09 |
| Zm00001d027904_P001 | Maize | plastid | 54.25 | 49.36 |
| Zm00001d032948_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 49.19 | 49.09 |
| Zm00001d028406_P001 | Maize | peroxisome | 54.05 | 48.81 |
| Zm00001d047931_P001 | Maize | peroxisome | 53.44 | 48.35 |
| Zm00001d014168_P001 | Maize | peroxisome, plasma membrane, plastid | 48.99 | 47.92 |
| Zm00001d027766_P001 | Maize | mitochondrion | 50.81 | 47.45 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | EntrezGene:100191595 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 |
| InterPro:ACP_syn_III_C | UniProt:B4G0N2 | EMBL:BT042920 | EMBL:BT067805 | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | InterPro:IPR016039 | ProteinID:ONL95169.1 | ProteinID:ONL95170.1 | PFAM:PF08392 | PFAM:PF08541 |
| PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF5 | SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like |
| UniParc:UPI00017B749C | EnsemblPlantsGene:Zm00001d028241 | EnsemblPlants:Zm00001d028241_P003 | EnsemblPlants:Zm00001d028241_T003 | SEG:seg | : |
Description
3-ketoacyl-CoA synthase
Coordinates
chr1:-:27700704..27702800
Molecular Weight (calculated)
55513.8 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.013
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSGGVFSGS VNLKHVKLGY QYLVNHFLTL LLVPVMAATA LELARLGPGE LLSLWRSLEL DLVHILCSAF LVVFVGTVYV MSRPRPVYLV DYACYKPPAS
101: CRVPFATFME HTRLISDDDK SVRFQTRILE RSGLGEDTCL PPANHYIPPN PSMEASRAEA QLVIFSAIDD LVRRTGLKPK DIDILVVNCS LFSPTPSLSA
201: MIINKYKLRS NIRSFNLSGM GCSAGLISID LARDMLQVHP NSNALVVSTE IITPNFYQGS RRDMLLPNCL FRMGAAAILL SNRRREARRA KYRLVHVVRT
301: HKGADDRAYR CVYEEEDEQG FSGISLSKEL MAIAGDALKS NITTIGPLVL PMSEQLLFFF RLVGRKLVNK GWRPYIPDFK LAFEHFCIHA GGRAVIDELQ
401: KNLQLSPRHV EASRMTLHRF GNTSSSSLWY ELAYIEAKGR MRRGDRVWQI GFGSGFKCNS AVWKCLRSIK TPTNGPWDDC IHRYPVDVPE VVKL
101: CRVPFATFME HTRLISDDDK SVRFQTRILE RSGLGEDTCL PPANHYIPPN PSMEASRAEA QLVIFSAIDD LVRRTGLKPK DIDILVVNCS LFSPTPSLSA
201: MIINKYKLRS NIRSFNLSGM GCSAGLISID LARDMLQVHP NSNALVVSTE IITPNFYQGS RRDMLLPNCL FRMGAAAILL SNRRREARRA KYRLVHVVRT
301: HKGADDRAYR CVYEEEDEQG FSGISLSKEL MAIAGDALKS NITTIGPLVL PMSEQLLFFF RLVGRKLVNK GWRPYIPDFK LAFEHFCIHA GGRAVIDELQ
401: KNLQLSPRHV EASRMTLHRF GNTSSSSLWY ELAYIEAKGR MRRGDRVWQI GFGSGFKCNS AVWKCLRSIK TPTNGPWDDC IHRYPVDVPE VVKL
001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL
Arabidopsis Description
CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.