Factsheet for Solyc05g009270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 4
cytosol 1
extracellular 3
vacuole 3
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037714	Potato	plasma membrane	95.55	95.55
Solyc02g085870.2.1	Tomato	plasma membrane	75.3	75.0
Solyc02g063140.2.1	Tomato	golgi	73.28	72.98
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi, plasma membrane	63.77	71.11
GSMUA_Achr2P21590_001	Banana	golgi, peroxisome, plastid	54.86	70.21
GSMUA_Achr3P02180_001	Banana	plasma membrane	49.8	69.69
EER92628	Sorghum	plasma membrane	69.23	69.23
Os03t0220100-01	Rice	golgi, mitochondrion	68.83	68.83
Zm00001d028241_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	68.62	68.62
TraesCS4A01G065300.1	Wheat	mitochondrion, plasma membrane	68.22	67.94
TraesCS4D01G242200.1	Wheat	mitochondrion, plasma membrane	68.22	67.94
GSMUA_Achr3P07400_001	Banana	plasma membrane	52.83	67.1
HORVU4Hr1G067340.2	Barley	golgi	68.02	67.07
Solyc05g009280.2.1	Tomato	golgi, plasma membrane, plastid	70.04	66.67
Zm00001d045660_P001	Maize	mitochondrion	38.87	65.98
Zm00001d048061_P001	Maize	golgi	65.79	65.79
GSMUA_Achr8P30930_001	Banana	endoplasmic reticulum, extracellular	50.81	65.03
Zm00001d037328_P001	Maize	cytosol	47.37	63.76
GSMUA_Achr5P05870_001	Banana	plasma membrane	50.81	59.76
Zm00001d051787_P001	Maize	mitochondrion	56.88	57.94
TraesCS7A01G205700.1	Wheat	golgi	57.49	57.84
TraesCS7B01G113000.1	Wheat	golgi	57.49	57.84
TraesCS7A01G032900.1	Wheat	cytosol	40.49	57.8
TraesCS1B01G421100.1	Wheat	golgi	54.25	57.76
TraesCS4D01G008100.1	Wheat	plasma membrane	50.0	57.71
TraesCS7D01G208500.1	Wheat	golgi	57.69	57.69
TraesCS1D01G401000.1	Wheat	plasma membrane	54.05	57.54
TraesCS1A01G392800.1	Wheat	plasma membrane	54.05	57.42
KXG30818	Sorghum	golgi, mitochondrion	56.48	57.29
HORVU6Hr1G073300.1	Barley	golgi, plasma membrane	55.87	57.02
TraesCS6D01G274600.1	Wheat	golgi, plasma membrane	55.87	57.02
TraesCS4B01G274700.1	Wheat	plastid	55.26	56.99
TraesCS4A01G031500.1	Wheat	plasma membrane	55.47	56.73
Solyc04g080450.1.1	Tomato	golgi, peroxisome, plasma membrane	59.31	56.67
TraesCS6A01G293700.1	Wheat	golgi, plasma membrane	55.47	56.61
HORVU0Hr1G038430.1	Barley	endoplasmic reticulum, plasma membrane	52.63	56.52
TraesCS4D01G273400.1	Wheat	endoplasmic reticulum	55.26	56.52
TraesCS6B01G324200.1	Wheat	plasma membrane	55.26	56.41
Solyc06g065560.1.1	Tomato	nucleus	58.5	56.34
Solyc08g067410.1.1	Tomato	plasma membrane	57.49	56.24
Solyc12g006820.1.1	Tomato	plasma membrane	56.88	56.2
Zm00001d017941_P001	Maize	plasma membrane	56.07	56.19
TraesCS7D01G208600.1	Wheat	cytosol	43.32	56.02
Os02t0731900-01	Rice	plasma membrane	56.68	55.89
KXG19727	Sorghum	mitochondrion, plastid	55.47	55.58
Solyc09g083050.2.1	Tomato	plasma membrane	57.69	55.56
TraesCS4A01G303900.1	Wheat	plasma membrane	55.26	55.49
TraesCSU01G166100.1	Wheat	plasma membrane	54.86	55.08
TraesCS7D01G035700.1	Wheat	plasma membrane	53.64	54.64
HORVU7Hr1G006910.1	Barley	plasma membrane	53.85	54.62
EER89559	Sorghum	mitochondrion, plasma membrane	54.05	54.49
TraesCS7A01G532300.1	Wheat	golgi	52.83	54.49
TraesCS7D01G519400.1	Wheat	plasma membrane	52.83	54.49
Os06t0262800-01	Rice	plasma membrane	54.45	54.45
TraesCS7D01G519300.1	Wheat	golgi, plasma membrane	52.63	54.39
Solyc03g005320.2.1	Tomato	plasma membrane	57.09	54.34
KXG19733	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	51.82	53.22
TraesCS7B01G449300.1	Wheat	plasma membrane	51.42	53.14
TraesCS7D01G209400.1	Wheat	cytosol	40.08	52.94
TraesCS7A01G532200.1	Wheat	cytosol	11.13	52.88
HORVU1Hr1G086760.1	Barley	cytosol	53.85	52.67
TraesCS3B01G488500.1	Wheat	plasma membrane	52.02	52.45
TraesCS3D01G444000.1	Wheat	golgi	51.82	52.35
TraesCS7D01G029500.1	Wheat	plasma membrane	48.38	52.3
TraesCS7B01G449000.1	Wheat	golgi	51.42	52.16
TraesCS3A01G451100.1	Wheat	plasma membrane	51.21	51.74
TraesCS6A01G341400.1	Wheat	golgi	52.63	51.69
Solyc06g053870.2.1	Tomato	mitochondrion	50.61	51.44
TraesCS4A01G456600.1	Wheat	plasma membrane	47.17	51.43
HORVU3Hr1G097570.1	Barley	golgi	50.81	51.33
Solyc05g013220.2.1	Tomato	endoplasmic reticulum, golgi, plastid	51.21	51.32
EER88189	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	50.0	51.24
TraesCS7A01G108300.1	Wheat	plasma membrane	46.15	50.89
TraesCS6B01G373000.1	Wheat	endoplasmic reticulum, golgi	42.91	50.84
TraesCS7D01G102300.1	Wheat	mitochondrion	29.76	50.69
TraesCS2D01G508000.1	Wheat	mitochondrion	32.59	50.63
TraesCS1A01G040900.1	Wheat	golgi	48.99	50.63
TraesCS1D01G042300.1	Wheat	golgi	48.99	50.63
TraesCS7D01G089200.1	Wheat	endoplasmic reticulum, plasma membrane	48.38	50.53
TraesCS6D01G321600.1	Wheat	golgi	51.42	50.5
Solyc10g009240.2.1	Tomato	peroxisome	54.05	50.47
TraesCS6B01G372900.1	Wheat	golgi	51.21	50.3
EER89567	Sorghum	endoplasmic reticulum, golgi, plastid	46.36	50.22
HORVU7Hr1G023540.1	Barley	mitochondrion	28.95	50.18
TraesCS7A01G205800.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.34	49.78
TraesCS3A01G279400.1	Wheat	plasma membrane	49.19	49.69
TraesCS3D01G279300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.99	49.69
OQU76197	Sorghum	golgi	48.18	49.69
TraesCS2A01G014600.1	Wheat	plasma membrane	49.8	49.6
EES00849	Sorghum	endoplasmic reticulum, golgi	49.6	49.6
TraesCS1A01G037600.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.99	49.59
TraesCS7B01G113100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	45.14	49.56
TraesCS7B01G113200.1	Wheat	golgi	49.8	49.5
TraesCS7A01G206000.1	Wheat	golgi	49.39	49.49
HORVU6Hr1G082270.1	Barley	golgi	51.21	49.41
HORVU7Hr1G042040.1	Barley	golgi	49.6	49.4
EES03073	Sorghum	endoplasmic reticulum, golgi, plasma membrane	48.99	49.39
HORVU6Hr1G094160.2	Barley	endoplasmic reticulum, golgi, plasma membrane	48.99	49.39
Zm00001d009354_P001	Maize	endoplasmic reticulum	48.58	49.38
Os01t0529800-01	Rice	plasma membrane	47.77	49.37
Solyc06g053900.2.1	Tomato	cytosol, plasma membrane, plastid	49.39	49.29
TraesCS6B01G036000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.58	49.18
TraesCS7D01G208800.1	Wheat	endoplasmic reticulum	48.18	49.07
HORVU6Hr1G004830.1	Barley	golgi	48.99	48.79
TraesCS1B01G048000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.18	48.77
TraesCS1B01G053700.1	Wheat	endoplasmic reticulum	48.99	48.69
HORVU7Hr1G023280.1	Barley	plasma membrane	44.53	48.67
TraesCS6A01G024400.1	Wheat	plasma membrane	48.18	48.67
TraesCS1D01G039200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	47.77	48.56
TraesCS5D01G089800.1	Wheat	golgi	47.98	48.47
Zm00001d044580_P001	Maize	mitochondrion	47.57	48.25
HORVU7Hr1G042050.1	Barley	golgi	47.37	48.05
TraesCS6A01G025200.1	Wheat	plasma membrane	46.96	47.64
TraesCS3B01G313800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.79	47.63
TraesCS7D01G208700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	44.53	47.62
TraesCS2D01G508200.1	Wheat	plasma membrane, plastid	44.13	47.6
TraesCS5A01G076500.1	Wheat	golgi	46.96	47.25
Os06t0260500-00	Rice	mitochondrion	50.4	47.25
TraesCS4D01G008200.1	Wheat	plasma membrane	46.56	46.75
TraesCS2D01G508300.1	Wheat	endoplasmic reticulum, plasma membrane	43.52	46.64
TraesCS7B01G006100.1	Wheat	mitochondrion	45.95	46.61
HORVU7Hr1G022720.1	Barley	plasma membrane	33.81	46.52
TraesCS7D01G102900.1	Wheat	golgi, plasma membrane, plastid	45.14	46.46
Zm00001d044579_P001	Maize	golgi	46.36	46.36
TraesCS7D01G102800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	42.11	46.33
TraesCS2A01G507700.1	Wheat	golgi, plasma membrane	42.91	46.29
TraesCS7A01G108000.1	Wheat	golgi, plasma membrane, plastid	44.94	46.25
TraesCS2B01G535600.1	Wheat	golgi, mitochondrion	45.34	46.19
TraesCS7D01G102400.1	Wheat	endoplasmic reticulum, plastid, vacuole	44.53	45.83
TraesCS2B01G535700.1	Wheat	endoplasmic reticulum, plasma membrane	42.31	45.63
HORVU5Hr1G122360.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.55	45.55
TraesCS1A01G439000.1	Wheat	plasma membrane	45.95	45.4
HORVU5Hr1G087530.1	Barley	plasma membrane	44.53	45.27
HORVU2Hr1G112840.1	Barley	endoplasmic reticulum, golgi	42.71	45.09
TraesCS7B01G006300.1	Wheat	golgi	44.13	44.76
HORVU3Hr1G069880.2	Barley	mitochondrion, plastid	48.38	44.59
Solyc08g067260.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.34	44.27
HORVU7Hr1G022780.1	Barley	golgi, mitochondrion	42.11	43.88
TraesCS7D01G102000.1	Wheat	mitochondrion, plastid	43.93	43.66
TraesCS5D01G017000.1	Wheat	endoplasmic reticulum, golgi, plastid	41.7	43.64
TraesCS7A01G107900.1	Wheat	golgi, mitochondrion	42.11	43.61
TraesCS7A01G107700.1	Wheat	mitochondrion, plastid	43.72	43.46
Solyc09g065800.2.1	Tomato	endoplasmic reticulum, plasma membrane	39.68	43.46
HORVU7Hr1G030880.1	Barley	plasma membrane	43.52	43.09
Solyc09g065780.2.1	Tomato	endoplasmic reticulum, golgi	37.45	41.86
HORVU7Hr1G022580.1	Barley	golgi, mitochondrion	30.57	41.37

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	InterPro:3-ktacl-CoA_syn	Gene3D:3.40.47.10	MapMan:5.1.6.1.1	InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4BXA1	PFAM:PF08392
PFAM:PF08541	PIRSF:PIRSF036417	PANTHER:PTHR31561	PANTHER:PTHR31561:SF5	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc05g009270.2
EnsemblPlants:Solyc05g009270.2.1	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000276689F	SEG:seg	:

Description

3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:K4BXA1]

Coordinates

chr5:-:3413778..3416600

Molecular Weight (calculated)

55729.4 Da

IEP (calculated)

8.862

GRAVY (calculated)

0.039

Length

494 amino acids

Sequence
(BLAST)

001: MPENSHSIKL RYIKLGYQYL VNNFLTFLLV PIMATILIQF LQSNPNELIK FYNSLSFTSI HLVCSLFLVT YVTTCYIMSR PRTIYLVDYA CFLPPITNRI
101: PFASFMEHAH LILSTEPKSV RFQMKILERS GLSEETALPP PMHYIPPTPT MDLAREEAEL VIFSAMDSLL AKTGLKPKDI DVLVVNCSLF SPTPSLSAMV
201: INKYKLRSNI KSFNLSGMGC SAGVISIDLA RDILQQYPNS NAVVISTEIL TPNGYLGKER SMLLTNCLFR MGGAAILLSN KKSDRGRSKY RLLHIVRTLK
301: GGDDKSFRCV QQQEDPEGKV GINLCIDLMQ VAGEALKSNI TTIGPLVLPA SEQLLFLLTL ICRKLFKSNM KPYIPDFKLA FEHFCIHAGG RAVIDELQNN
401: LQLSTEHVEA SRMTLYRFGN TSSSSLWYEM SYIEAKGRMK KGDRIWQIAF GSGFKCNSAV WKCNKTIKLP VDDHNPWADC IDRYPVDIPD VVRL

Best Arabidopsis Sequence Match ( AT1G68530.1 )
(BLAST)

001: MPQAPMPEFS SSVKLKYVKL GYQYLVNHFL SFLLIPIMAI VAVELLRMGP EEILNVWNSL QFDLVQVLCS SFFVIFISTV YFMSKPRTIY LVDYSCYKPP
101: VTCRVPFATF MEHSRLILKD KPKSVEFQMR ILERSGLGEE TCLPPAIHYI PPTPTMDAAR SEAQMVIFEA MDDLFKKTGL KPKDVDILIV NCSLFSPTPS
201: LSAMVINKYK LRSNIKSFNL SGMGCSAGLI SVDLARDLLQ VHPNSNAIIV STEIITPNYY QGNERAMLLP NCLFRMGAAA IHMSNRRSDR WRAKYKLSHL
301: VRTHRGADDK SFYCVYEQED KEGHVGINLS KDLMAIAGEA LKANITTIGP LVLPASEQLL FLTSLIGRKI FNPKWKPYIP DFKLAFEHFC IHAGGRAVID
401: ELQKNLQLSG EHVEASRMTL HRFGNTSSSS LWYELSYIES KGRMRRGDRV WQIAFGSGFK CNSAVWKCNR TIKTPKDGPW SDCIDRYPVF IPEVVKL

Arabidopsis Description

CUT13-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WCX7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.